Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC073111.2-201ENST00000605657 1075 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 AL359513.1-201ENST00000614364 557 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC008115.4-201ENST00000619780 775 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC138907.10-201ENST00000623708 983 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC068057.2-201ENST00000624047 895 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 SAMMSON-209ENST00000641222 1100 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC087516.1-201ENST00000561236 2428 ntBASIC6.67□□□□□ -1.34
HLA-DOAP06340 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.67□□□□□ -1.34
HLA-DOAP06340 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-DOAP06340 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-DOAP06340 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-DOAP06340 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-DOAP06340 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 SNORA63.3-201ENST00000362682 132 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 MIR551A-201ENST00000385042 96 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 RNA5SP91-201ENST00000390902 119 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 RPL7P39-201ENST00000481157 744 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC117525.1-201ENST00000515228 503 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC112198.4-201ENST00000515450 351 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC021146.10-201ENST00000515628 706 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 AP001804.1-201ENST00000526868 919 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 MIR1269B-201ENST00000580405 75 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC015911.5-201ENST00000587076 451 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC133794.1-201ENST00000602731 914 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AL133481.2-203ENST00000607558 139 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC120053.1-201ENST00000607706 736 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC097065.2-201ENST00000608159 533 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC136428.4-201ENST00000634254 1155 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-DOAP06340 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-DOAP06340 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-DOAP06340 AL139805.2-201ENST00000455305 2433 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-DOAP06340 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-DOAP06340 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
HLA-DOAP06340 CASC19-243ENST00000641588 1546 ntBASIC6.66□□□□□ -1.34
HLA-DOAP06340 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-DOAP06340 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-DOAP06340 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-DOAP06340 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-DOAP06340 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-DOAP06340 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-DOAP06340 RPL11P3-201ENST00000395256 523 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 AL035405.1-201ENST00000400795 710 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 AC114973.1-201ENST00000429057 632 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 AC073410.1-201ENST00000435125 589 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 MTATP6P26-201ENST00000445926 662 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-DOAP06340 RSU1P1-201ENST00000453416 441 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 TRAV31-201ENST00000502780 342 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 AC096571.1-202ENST00000506634 735 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 IGLV3-24-201ENST00000517477 197 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms