Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.93□□□□□ -1.3
COL5A2P05997 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.93□□□□□ -1.3
COL5A2P05997 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL5A2P05997 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
COL5A2P05997 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.93□□□□□ -1.3
COL5A2P05997 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.92□□□□□ -1.3
COL5A2P05997 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
COL5A2P05997 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL5A2P05997 RNA5SP90-201ENST00000364801 99 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 SNORA62-201ENST00000365493 153 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 RN7SKP114-201ENST00000410327 279 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 RNA5SP113-201ENST00000410486 84 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 RN7SKP100-201ENST00000411258 284 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 KRT8P51-201ENST00000438938 274 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.92□□□□□ -1.3
COL5A2P05997 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
COL5A2P05997 HPRT1P1-201ENST00000509498 657 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.92□□□□□ -1.3
COL5A2P05997 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.92□□□□□ -1.3
COL5A2P05997 AC012400.1-201ENST00000518452 381 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 IGKV1-32-201ENST00000519290 311 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.92□□□□□ -1.3
COL5A2P05997 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
COL5A2P05997 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.92□□□□□ -1.3
COL5A2P05997 ATP5J2P6-201ENST00000565203 266 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.92□□□□□ -1.3
COL5A2P05997 AL391358.1-201ENST00000605342 190 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 AC010480.1-201ENST00000624823 684 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.92□□□□□ -1.3
COL5A2P05997 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL5A2P05997 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
COL5A2P05997 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
COL5A2P05997 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.92□□□□□ -1.3
COL5A2P05997 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
COL5A2P05997 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.92□□□□□ -1.3
COL5A2P05997 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.92□□□□□ -1.3
COL5A2P05997 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 AC005831.1-201ENST00000624384 1697 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 RNU2-50P-201ENST00000410494 143 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.92□□□□□ -1.3
COL5A2P05997 PRPF38AP2-201ENST00000438179 851 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.92□□□□□ -1.3
COL5A2P05997 RBMY2TP-201ENST00000451162 947 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.92□□□□□ -1.3
COL5A2P05997 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.92□□□□□ -1.3
COL5A2P05997 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.92□□□□□ -1.3
COL5A2P05997 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.92□□□□□ -1.3
COL5A2P05997 AC074050.1-201ENST00000563247 211 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.92□□□□□ -1.3
COL5A2P05997 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL5A2P05997 AC244107.2-201ENST00000611773 76 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 AC012414.7-202ENST00000622705 1090 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.92□□□□□ -1.3
COL5A2P05997 AL158152.1-201ENST00000602652 1435 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
COL5A2P05997 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
COL5A2P05997 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.91□□□□□ -1.3
COL5A2P05997 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A2P05997 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A2P05997 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A2P05997 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.91□□□□□ -1.3
COL5A2P05997 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A2P05997 BX284613.1-201ENST00000452221 1641 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A2P05997 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A2P05997 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL5A2P05997 AC010168.2-201ENST00000562691 5428 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A2P05997 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
COL5A2P05997 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
COL5A2P05997 GLULP6-201ENST00000399502 913 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A2P05997 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A2P05997 P2RY10P2-201ENST00000416730 913 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.91□□□□□ -1.3
COL5A2P05997 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.91□□□□□ -1.3
COL5A2P05997 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.91□□□□□ -1.3
COL5A2P05997 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
COL5A2P05997 AC091912.1-201ENST00000511351 248 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 SCARNA20.4-201ENST00000516969 131 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 AC034205.1-201ENST00000520621 638 ntBASIC6.91□□□□□ -1.3
COL5A2P05997 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms