Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC009948.3-201ENST00000603415 1798 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC4.99□□□□□ -1.61
SPTA1P02549 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 AC092821.3-202ENST00000641304 2767 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.99□□□□□ -1.61
SPTA1P02549 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.99□□□□□ -1.61
SPTA1P02549 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SPTA1P02549 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.99□□□□□ -1.61
SPTA1P02549 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SPTA1P02549 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.99□□□□□ -1.61
SPTA1P02549 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.99□□□□□ -1.61
SPTA1P02549 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SPTA1P02549 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.98□□□□□ -1.61
SPTA1P02549 Z92846.1-201ENST00000456203 268 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 EIF3KP3-201ENST00000514461 639 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 OR5AM1P-201ENST00000532136 1032 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
SPTA1P02549 AC092490.3-201ENST00000545370 572 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.98□□□□□ -1.61
SPTA1P02549 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SPTA1P02549 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC4.98□□□□□ -1.61
SPTA1P02549 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 RMST-210ENST00000640149 2844 ntTSL 5 BASIC4.98□□□□□ -1.61
SPTA1P02549 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.98□□□□□ -1.61
SPTA1P02549 PARP4P1-201ENST00000435945 2337 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC4.98□□□□□ -1.61
SPTA1P02549 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 NLRP3P1-201ENST00000622303 1785 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.98□□□□□ -1.61
SPTA1P02549 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SPTA1P02549 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
SPTA1P02549 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.98□□□□□ -1.61
SPTA1P02549 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC4.98□□□□□ -1.61
SPTA1P02549 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 SNORA57.1-201ENST00000391227 145 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.98□□□□□ -1.61
SPTA1P02549 AC007064.3-201ENST00000422608 359 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.98□□□□□ -1.61
SPTA1P02549 DNAJA1P6-201ENST00000437347 354 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 AL353748.1-201ENST00000440753 474 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 RBMY2TP-201ENST00000451162 947 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 MEMO1P4-201ENST00000453590 386 ntBASIC4.98□□□□□ -1.61
SPTA1P02549 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.98□□□□□ -1.61
SPTA1P02549 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SPTA1P02549 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SPTA1P02549 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SPTA1P02549 RN7SKP145-201ENST00000363291 303 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SPTA1P02549 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.97□□□□□ -1.61
SPTA1P02549 AL672138.1-201ENST00000450604 1015 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 RPL7L1P8-201ENST00000469911 741 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.97□□□□□ -1.61
SPTA1P02549 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.97□□□□□ -1.61
SPTA1P02549 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.97□□□□□ -1.61
SPTA1P02549 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.97□□□□□ -1.61
SPTA1P02549 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.97□□□□□ -1.61
SPTA1P02549 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.97□□□□□ -1.61
SPTA1P02549 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.97□□□□□ -1.61
SPTA1P02549 AC090527.3-201ENST00000619041 548 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 PWAR1-201ENST00000624188 2414 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 MFSD8-220ENST00000641243 1422 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SPTA1P02549 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SPTA1P02549 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SPTA1P02549 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SPTA1P02549 CASC19-260ENST00000641828 2001 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SPTA1P02549 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.97□□□□□ -1.61
SPTA1P02549 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SPTA1P02549 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SPTA1P02549 SNORA37-201ENST00000384504 129 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SPTA1P02549 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.97□□□□□ -1.61
SPTA1P02549 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.97□□□□□ -1.61
SPTA1P02549 FTH1P25-201ENST00000447665 469 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC4.97□□□□□ -1.61
SPTA1P02549 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.97□□□□□ -1.61
SPTA1P02549 BGLT3-201ENST00000564523 994 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.97□□□□□ -1.61
SPTA1P02549 AC053481.3-201ENST00000577881 843 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.97□□□□□ -1.61
SPTA1P02549 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.97□□□□□ -1.61
SPTA1P02549 AC109583.2-201ENST00000617367 129 ntBASIC4.97□□□□□ -1.61
SPTA1P02549 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SPTA1P02549 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC4.97□□□□□ -1.61
SPTA1P02549 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms