Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.41□□□□□ -1.38
COL1A1P02452 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.41□□□□□ -1.38
COL1A1P02452 AC004980.4-201ENST00000513375 203 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.41□□□□□ -1.38
COL1A1P02452 OR4A17P-201ENST00000526032 904 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 AC025857.2-201ENST00000602711 238 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 AC000095.2-202ENST00000637415 154 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 AC015799.1-201ENST00000622996 3122 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 EPS15P1-202ENST00000459691 2071 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.41□□□□□ -1.38
COL1A1P02452 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.41□□□□□ -1.38
COL1A1P02452 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 AC016745.2-201ENST00000608834 3443 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.41□□□□□ -1.38
COL1A1P02452 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.41□□□□□ -1.38
COL1A1P02452 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL1A1P02452 RN7SKP185-201ENST00000362813 326 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
COL1A1P02452 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL1A1P02452 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.41□□□□□ -1.38
COL1A1P02452 RPS4XP20-201ENST00000505751 772 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 SEPT10P1-201ENST00000517342 1162 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.41□□□□□ -1.38
COL1A1P02452 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL1A1P02452 AL138960.1-201ENST00000613838 513 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 AC087385.3-201ENST00000620477 187 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.41□□□□□ -1.38
COL1A1P02452 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL1A1P02452 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL1A1P02452 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL1A1P02452 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL1A1P02452 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL1A1P02452 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
COL1A1P02452 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL1A1P02452 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL1A1P02452 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
COL1A1P02452 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.4□□□□□ -1.38
COL1A1P02452 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.4□□□□□ -1.38
COL1A1P02452 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
COL1A1P02452 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL1A1P02452 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL1A1P02452 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.4□□□□□ -1.39
COL1A1P02452 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL1A1P02452 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL1A1P02452 AL078599.1-201ENST00000402075 293 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.4□□□□□ -1.39
COL1A1P02452 RPL26P29-201ENST00000415623 438 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 AC245028.1-201ENST00000423259 256 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 AL049745.1-201ENST00000433953 286 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.4□□□□□ -1.39
COL1A1P02452 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.4□□□□□ -1.39
COL1A1P02452 NOP56P2-201ENST00000447491 769 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 TRY2P-201ENST00000448860 689 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.4□□□□□ -1.39
COL1A1P02452 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 AC130364.2-201ENST00000528639 604 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.4□□□□□ -1.39
COL1A1P02452 ELOCP28-201ENST00000590044 317 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 AC099494.2-201ENST00000623371 978 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 AC112694.2-201ENST00000623697 768 ntBASIC6.4□□□□□ -1.39
COL1A1P02452 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL1A1P02452 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
COL1A1P02452 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
COL1A1P02452 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL1A1P02452 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COL1A1P02452 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
COL1A1P02452 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.39□□□□□ -1.39
COL1A1P02452 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
COL1A1P02452 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COL1A1P02452 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.39□□□□□ -1.39
COL1A1P02452 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.39□□□□□ -1.39
COL1A1P02452 NDUFB4P8-201ENST00000435351 367 ntBASIC6.39□□□□□ -1.39
COL1A1P02452 AC093827.1-201ENST00000480094 861 ntBASIC6.39□□□□□ -1.39
COL1A1P02452 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.39□□□□□ -1.39
COL1A1P02452 GSTP1P1-201ENST00000548078 319 ntBASIC6.39□□□□□ -1.39
COL1A1P02452 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.39□□□□□ -1.39
COL1A1P02452 EDDM3DP-201ENST00000554692 434 ntBASIC6.39□□□□□ -1.39
COL1A1P02452 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms