Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC003973.3-201ENST00000624863 2822 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 RNU1-19P-201ENST00000363306 165 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 YWHAZP6-201ENST00000399764 738 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AL139805.1-201ENST00000407837 289 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC046176.1-201ENST00000435260 1170 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 ARMC4P1-201ENST00000438905 707 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC007383.1-201ENST00000445875 636 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC002553.3-201ENST00000453002 341 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC098847.1-201ENST00000473094 348 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC098818.1-201ENST00000478593 252 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 EIF4E2P2-201ENST00000492033 736 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 RN7SL568P-201ENST00000493069 298 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 NIFKP7-201ENST00000503365 834 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC092349.1-201ENST00000504903 310 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC138409.2-202ENST00000507274 458 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 OR4A41P-201ENST00000533053 928 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC004232.2-201ENST00000574245 821 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC090607.5-201ENST00000615692 224 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC099654.6-201ENST00000636487 512 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AL357140.4-201ENST00000636827 412 ntBASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1P01909 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.09□□□□□ -1.76
HLA-DQA1P01909 AC079298.1-201ENST00000625026 1619 ntBASIC4.09□□□□□ -1.76
HLA-DQA1P01909 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DQA1P01909 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
HLA-DQA1P01909 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.09□□□□□ -1.76
HLA-DQA1P01909 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DQA1P01909 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 RNU1-134P-201ENST00000362935 165 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 RBBP4P5-201ENST00000398583 1266 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 RNA5SP296-201ENST00000410523 111 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AL596266.1-201ENST00000448132 400 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AP002371.1-201ENST00000463604 433 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC022133.1-201ENST00000490961 571 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 RN7SL362P-201ENST00000494228 267 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1P01909 SCARNA20.4-201ENST00000516969 131 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 HMGB1P19-201ENST00000517578 577 ntBASIC4.08□□□□□ -1.76
HLA-DQA1P01909 AC022360.1-201ENST00000521058 340 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms