Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 IGKV3D-34-201ENST00000522638 302 ntBASIC5.89□□□□□ -1.47
O00370 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.89□□□□□ -1.47
O00370 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.89□□□□□ -1.47
O00370 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.89□□□□□ -1.47
O00370 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.89□□□□□ -1.47
O00370 AC009852.2-201ENST00000567898 485 ntBASIC5.89□□□□□ -1.47
O00370 MIR1273E-201ENST00000581165 102 ntBASIC5.89□□□□□ -1.47
O00370 H3F3BP2-201ENST00000583907 357 ntBASIC5.89□□□□□ -1.47
O00370 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.89□□□□□ -1.47
O00370 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.89□□□□□ -1.47
O00370 AC012616.1-201ENST00000600294 197 ntBASIC5.89□□□□□ -1.47
O00370 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.89□□□□□ -1.47
O00370 FO393422.1-201ENST00000603908 708 ntBASIC5.89□□□□□ -1.47
O00370 AC092944.2-201ENST00000605443 889 ntBASIC5.89□□□□□ -1.47
O00370 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.89□□□□□ -1.47
O00370 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.89□□□□□ -1.47
O00370 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.89□□□□□ -1.47
O00370 AP005212.4-201ENST00000614206 710 ntBASIC5.89□□□□□ -1.47
O00370 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
O00370 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.89□□□□□ -1.47
O00370 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.89□□□□□ -1.47
O00370 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
O00370 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.89□□□□□ -1.47
O00370 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
O00370 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.89□□□□□ -1.47
O00370 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
O00370 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
O00370 AC083899.1-201ENST00000454465 3819 ntBASIC5.89□□□□□ -1.47
O00370 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
O00370 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
O00370 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.88□□□□□ -1.47
O00370 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
O00370 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 SNORA70.6-201ENST00000383934 134 ntBASIC5.88□□□□□ -1.47
O00370 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 AL358178.1-201ENST00000407698 397 ntBASIC5.88□□□□□ -1.47
O00370 RNA5SP178-201ENST00000410380 128 ntBASIC5.88□□□□□ -1.47
O00370 DPPA2P2-201ENST00000418220 897 ntBASIC5.88□□□□□ -1.47
O00370 RIMKLBP2-201ENST00000424737 654 ntBASIC5.88□□□□□ -1.47
O00370 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.88□□□□□ -1.47
O00370 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.88□□□□□ -1.47
O00370 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.88□□□□□ -1.47
O00370 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.88□□□□□ -1.47
O00370 AC022404.1-201ENST00000555320 273 ntBASIC5.88□□□□□ -1.47
O00370 AC009237.13-201ENST00000603193 276 ntBASIC5.88□□□□□ -1.47
O00370 AL118522.2-201ENST00000616045 615 ntBASIC5.88□□□□□ -1.47
O00370 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.88□□□□□ -1.47
O00370 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.88□□□□□ -1.47
O00370 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 MAPK10-338ENST00000641647 3362 ntBASIC5.88□□□□□ -1.47
O00370 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
O00370 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
O00370 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.88□□□□□ -1.47
O00370 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.88□□□□□ -1.47
O00370 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
O00370 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
O00370 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
O00370 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.87□□□□□ -1.47
O00370 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
O00370 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
O00370 AC144833.1-201ENST00000567953 4089 ntBASIC5.87□□□□□ -1.47
O00370 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
O00370 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
O00370 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
O00370 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.87□□□□□ -1.47
O00370 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.87□□□□□ -1.47
O00370 RN7SKP28-201ENST00000364770 305 ntBASIC5.87□□□□□ -1.47
O00370 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
O00370 RN7SKP293-201ENST00000411389 296 ntBASIC5.87□□□□□ -1.47
O00370 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.87□□□□□ -1.47
O00370 AL034379.1-201ENST00000423216 253 ntBASIC5.87□□□□□ -1.47
O00370 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.87□□□□□ -1.47
O00370 RPL7P56-201ENST00000429441 717 ntBASIC5.87□□□□□ -1.47
O00370 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.87□□□□□ -1.47
O00370 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.87□□□□□ -1.47
O00370 AC092106.1-201ENST00000444291 373 ntBASIC5.87□□□□□ -1.47
O00370 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.87□□□□□ -1.47
O00370 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.87□□□□□ -1.47
O00370 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.87□□□□□ -1.47
O00370 AC091544.1-201ENST00000484702 348 ntBASIC5.87□□□□□ -1.47
O00370 EIF3LP3-201ENST00000495197 822 ntBASIC5.87□□□□□ -1.47
O00370 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.87□□□□□ -1.47
O00370 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.87□□□□□ -1.47
O00370 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.87□□□□□ -1.47
O00370 AC104695.2-201ENST00000605056 775 ntBASIC5.87□□□□□ -1.47
O00370 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.87□□□□□ -1.47
O00370 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.87□□□□□ -1.47
O00370 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.87□□□□□ -1.47
O00370 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
O00370 AC007938.2-201ENST00000604666 2634 ntBASIC5.87□□□□□ -1.47
O00370 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms