Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM1O00151 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.34□□□□□ -1.55
PDLIM1O00151 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM1O00151 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM1O00151 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM1O00151 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.34□□□□□ -1.55
PDLIM1O00151 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 AC025574.2-201ENST00000615621 514 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 AF117829.2-201ENST00000619538 361 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM1O00151 AC091932.2-201ENST00000623014 291 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 AC025262.3-201ENST00000623666 360 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PDLIM1O00151 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PDLIM1O00151 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
PDLIM1O00151 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDLIM1O00151 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 CASC19-238ENST00000641523 1558 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.33□□□□□ -1.56
PDLIM1O00151 QRSL1P1-201ENST00000400977 1540 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM1O00151 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM1O00151 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM1O00151 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.33□□□□□ -1.56
PDLIM1O00151 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM1O00151 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM1O00151 AC004386.1-201ENST00000393214 761 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 RAB5CP1-201ENST00000395972 580 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 SNORA11.5-201ENST00000408163 128 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 RN7SKP240-201ENST00000410583 375 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 RPL35AP3-201ENST00000414680 288 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.33□□□□□ -1.56
PDLIM1O00151 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM1O00151 AC023141.8-201ENST00000442554 208 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM1O00151 PRPF38AP1-201ENST00000451976 933 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 MEMO1P4-201ENST00000453590 386 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 SEPT14P1-201ENST00000458703 648 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 AC092865.4-201ENST00000477936 615 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.33□□□□□ -1.56
PDLIM1O00151 AC113430.1-201ENST00000506872 718 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 AC016559.2-201ENST00000510759 359 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 RNA5SP340-201ENST00000517132 107 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM1O00151 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM1O00151 AC110056.1-201ENST00000525759 911 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 AC079905.1-201ENST00000549280 475 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 AC007956.1-201ENST00000555623 542 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.33□□□□□ -1.56
PDLIM1O00151 RPA2P1-201ENST00000556557 721 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 AC091078.2-201ENST00000557145 559 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM1O00151 RN7SL52P-201ENST00000584271 284 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 AC090236.2-201ENST00000587933 1101 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 NANOGP3-201ENST00000605855 286 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 AC108865.2-201ENST00000606881 432 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.33□□□□□ -1.56
PDLIM1O00151 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM1O00151 MIR6809-201ENST00000612189 116 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 RN7SL787P-201ENST00000613000 284 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 RN7SL544P-201ENST00000617232 284 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 RN7SL763P-201ENST00000620922 284 ntBASIC5.33□□□□□ -1.56
PDLIM1O00151 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.33□□□□□ -1.56
PDLIM1O00151 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM1O00151 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM1O00151 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.33□□□□□ -1.56
PDLIM1O00151 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM1O00151 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.32□□□□□ -1.56
PDLIM1O00151 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM1O00151 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PDLIM1O00151 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 AL034549.2-201ENST00000618285 3373 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AC100778.3-201ENST00000580060 1750 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AC093909.5-201ENST00000621839 1799 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM1O00151 AL121886.1-201ENST00000358609 435 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 AC005042.1-201ENST00000393397 800 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM1O00151 AL078599.1-201ENST00000402075 293 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 RPS24P12-201ENST00000402084 394 ntBASIC5.32□□□□□ -1.56
PDLIM1O00151 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.32□□□□□ -1.56
PDLIM1O00151 RN7SKP199-201ENST00000410325 305 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms