Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNU1-108P-201ENST00000362556 161 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 RNA5SP326-201ENST00000363209 110 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SKP153-201ENST00000365026 316 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 TMED5-201ENST00000370280 750 ntTSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 HMGB3P7-201ENST00000400214 611 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AL079341.1-201ENST00000404701 1207 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SKP117-201ENST00000410175 264 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AL096829.1-201ENST00000413677 457 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 BX119321.1-201ENST00000428912 797 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 CENPN-204ENST00000428963 971 ntTSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 VN1R53P-201ENST00000429536 957 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 NANOGP9-201ENST00000439890 892 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AP006193.1-201ENST00000440724 485 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 EEF1A1P1-201ENST00000447052 739 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 MRPL35P2-201ENST00000448009 511 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 BTF3P6-201ENST00000448054 499 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC090804.1-201ENST00000448870 490 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AL603839.3-201ENST00000450713 605 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 SNORA35.1-201ENST00000458908 128 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC105918.1-201ENST00000474399 838 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 CBX1P5-201ENST00000475330 559 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL338P-201ENST00000481467 293 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 TAAR3P-202ENST00000481759 1025 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL182P-201ENST00000496499 300 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 CIPC-206ENST00000555611 599 ntTSL 4 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 RPL21P7-201ENST00000557463 483 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC007066.2-202ENST00000566531 914 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 DHFRP1-201ENST00000579682 559 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC108738.1-201ENST00000603703 237 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 MIR7847-201ENST00000610912 103 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 PQLC2L-203ENST00000449199 1484 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 PNPT1P2-201ENST00000456768 2050 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 EED-206ENST00000527888 1422 ntTSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC068254.2-201ENST00000623938 3577 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms