Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AL159987.1-201ENST00000347911 293 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 RN7SKP59-201ENST00000410520 314 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 BX510359.3-201ENST00000422168 306 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 VTI1BP4-201ENST00000427516 527 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 USP24P1-201ENST00000433802 779 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AL450996.1-201ENST00000445574 1202 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 OR7E116P-201ENST00000448529 957 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AC004129.2-201ENST00000457229 287 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AC098583.1-201ENST00000480875 255 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AC108693.1-201ENST00000496068 432 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 NPM1P52-201ENST00000518264 846 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AC008676.3-201ENST00000521237 435 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AC011270.1-201ENST00000558606 583 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 MIR1273E-201ENST00000581165 102 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AC013244.1-201ENST00000604279 193 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 AL035661.1-201ENST00000620459 1144 ntBASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NPIPA2E9PIF3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 HSPD1P7-201ENST00000447985 1686 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 RN7SKP162-201ENST00000363605 345 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 MIR1178-201ENST00000408396 91 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 RN7SKP278-201ENST00000410504 342 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 NPM1P4-201ENST00000414095 812 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AC092651.1-201ENST00000426110 312 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AC012075.1-201ENST00000436549 580 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 KRT8P51-201ENST00000438938 274 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 OR7L1P-201ENST00000456181 380 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 RPS23P2-201ENST00000463671 415 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AL133445.1-201ENST00000467051 452 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 RN7SL184P-201ENST00000488308 297 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 BX510359.5-201ENST00000515651 304 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AP002981.1-201ENST00000517692 975 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AL121839.1-201ENST00000556233 1185 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 AC051619.2-201ENST00000559063 397 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 RBM22P12-201ENST00000567098 1255 ntBASIC5.16□□□□□ -1.58
NPIPA2E9PIF3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms