Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC068870.1-201ENST00000563737 2455 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC107977.1-201ENST00000355745 939 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 OR13C3-201ENST00000374781 1108 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 RPS6P23-201ENST00000413224 722 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC245060.4-201ENST00000413293 1121 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 BX119904.3-201ENST00000428194 957 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 RPS10P18-201ENST00000442662 495 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 TAAR4P-201ENST00000454843 1039 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 RN7SL188P-201ENST00000469842 285 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC006499.4-201ENST00000510947 694 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 IGLV3-24-201ENST00000517477 197 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 TOMM20P1-201ENST00000534518 427 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC107958.1-201ENST00000556576 290 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC135626.1-201ENST00000556983 435 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC019322.1-201ENST00000571869 389 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC027216.1-201ENST00000577726 685 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AL138895.2-201ENST00000603019 178 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC067773.1-201ENST00000603284 1094 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 HSPA8P14-201ENST00000552265 1805 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 PWAR1-201ENST00000624188 2414 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 TCP11X1-202ENST00000622971 1372 ntBASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDD3Q9Y3P4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 OR7E25P-201ENST00000344844 931 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 RNU6-1331P-201ENST00000363658 106 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 RN7SKP81-201ENST00000365603 331 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 U3.28-201ENST00000391249 210 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 CXADRP1-201ENST00000398098 1095 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 OR7E101P-201ENST00000400428 513 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 RPL24P2-201ENST00000421023 475 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 TMEM183AP1-205ENST00000432739 290 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 HMGB3P24-201ENST00000433260 622 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AL359265.1-201ENST00000440296 795 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 THAP12P8-201ENST00000447914 2115 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 NPM1P39-201ENST00000449818 867 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AL591623.2-201ENST00000449978 222 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AP006222.1-205ENST00000450734 457 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AZGP1P2-201ENST00000454506 345 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 UBFD1P1-201ENST00000473259 814 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC022215.1-201ENST00000481770 362 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 KATNBL1P4-201ENST00000503545 918 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 NENFP3-201ENST00000503735 313 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC079064.1-201ENST00000528365 362 ntBASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RHBDD3Q9Y3P4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms