Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HSPA8P19-201ENST00000505359 1517 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 RNU6-650P-201ENST00000365658 111 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 RNU6-171P-201ENST00000384354 107 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AL133445.1-201ENST00000467051 452 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 RN7SKP157-201ENST00000516174 282 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC006115.2-201ENST00000596823 202 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC015849.2-201ENST00000605738 409 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC097504.2-201ENST00000608088 454 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC025016.1-201ENST00000616746 682 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 AL645927.2-201ENST00000618350 349 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 AL133370.2-201ENST00000619934 439 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC023510.2-201ENST00000622162 746 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC097460.3-201ENST00000623099 442 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC007114.2-201ENST00000576014 4281 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.45□□□□□ -1.38
COL20A1Q9P218 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.45□□□□□ -1.38
COL20A1Q9P218 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL20A1Q9P218 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC112255.1-201ENST00000624070 2493 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 PWAR1-201ENST00000624188 2414 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AL035405.1-201ENST00000400795 710 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 RPL35AP24-201ENST00000413846 330 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 UBE2D3P3-201ENST00000426992 425 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 FCF1P6-201ENST00000456841 595 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC108729.2-201ENST00000476543 840 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC093770.1-201ENST00000511559 571 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 HMGB1P46-201ENST00000520062 610 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC068339.2-201ENST00000534395 618 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 RBM22P12-201ENST00000567098 1255 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC010245.2-201ENST00000606908 1167 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC090607.5-201ENST00000615692 224 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC245389.2-201ENST00000616023 576 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 AC242843.1-201ENST00000618702 573 ntBASIC6.44□□□□□ -1.38
COL20A1Q9P218 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.44□□□□□ -1.38
COL20A1Q9P218 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL20A1Q9P218 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms