Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 CCNHP1-201ENST00000513311 678 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 CYP4F27P-201ENST00000514557 494 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 OR8K2P-201ENST00000524645 927 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AC004890.3-201ENST00000605566 1095 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AC211433.2-201ENST00000608433 387 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 AC009039.2-201ENST00000624524 529 ntBASIC5.95□□□□□ -1.46
EBF3Q9H4W6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.95□□□□□ -1.46
EBF3Q9H4W6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 CASC19-248ENST00000641674 1356 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC004076.2-201ENST00000620532 3323 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 U3.7-201ENST00000363668 216 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 U3.10-201ENST00000364459 214 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 SNORA72.3-201ENST00000365074 132 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 RNU6-171P-201ENST00000384354 107 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 U3.23-201ENST00000391132 200 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 DHFRP5-201ENST00000406944 564 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC106901.1-201ENST00000425086 698 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC113412.1-201ENST00000425840 504 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 BX276092.6-201ENST00000430476 250 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AL731534.1-201ENST00000434711 269 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 BX276092.8-201ENST00000455722 250 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC087672.1-201ENST00000479876 766 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 UBA52P7-201ENST00000486088 380 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AP001960.1-201ENST00000506494 658 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC113398.2-201ENST00000507630 558 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC016550.3-201ENST00000515706 767 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 MIR2117-201ENST00000516780 80 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 MTCO1P1-201ENST00000624263 1081 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AL449283.1-201ENST00000602631 3403 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 MTCO1P15-201ENST00000529569 1526 ntBASIC5.94□□□□□ -1.46
EBF3Q9H4W6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.94□□□□□ -1.46
EBF3Q9H4W6 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 GAPDHP24-201ENST00000328713 983 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 SNORD1C-201ENST00000363315 78 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 MIR105-2-201ENST00000385083 81 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms