Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX3Q99909 CYCSP11-201ENST00000436426 315 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 PA2G4P6-201ENST00000438325 1197 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 ARL5AP3-201ENST00000439327 386 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AL606490.8-201ENST00000441624 319 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 SEPT14P12-201ENST00000442280 560 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX3Q99909 AL591623.2-201ENST00000449978 222 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 CALM1P2-201ENST00000452941 448 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX3Q99909 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX3Q99909 AC094085.1-201ENST00000468914 584 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX3Q99909 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX3Q99909 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.96□□□□□ -1.62
SSX3Q99909 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX3Q99909 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX3Q99909 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.96□□□□□ -1.62
SSX3Q99909 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SSX3Q99909 RN7SKP238-201ENST00000516483 249 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 IGHV3-63-201ENST00000518422 341 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 IGKV3D-25-201ENST00000519599 235 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX3Q99909 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX3Q99909 AP003396.4-201ENST00000527574 265 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AC107918.3-201ENST00000533272 382 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX3Q99909 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX3Q99909 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX3Q99909 AC079905.1-201ENST00000549280 475 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX3Q99909 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.96□□□□□ -1.62
SSX3Q99909 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
SSX3Q99909 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX3Q99909 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX3Q99909 MIR4310-201ENST00000582950 57 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX3Q99909 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX3Q99909 AC084373.1-201ENST00000603311 235 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AC034236.3-201ENST00000605999 461 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AC012467.1-201ENST00000607740 256 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX3Q99909 AC092159.4-201ENST00000624944 550 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AC022726.2-201ENST00000634673 547 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX3Q99909 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 Z95331.1-201ENST00000623075 23112 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 AL158152.1-201ENST00000602652 1435 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SSX3Q99909 MFSD8-219ENST00000641228 2559 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 MT-RNR2-201ENST00000387347 1559 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 AP001541.1-201ENST00000623322 1904 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX3Q99909 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SSX3Q99909 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX3Q99909 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX3Q99909 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX3Q99909 AC132825.1-201ENST00000463573 2247 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 OR5T3-201ENST00000303059 1023 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.95□□□□□ -1.62
SSX3Q99909 RNU6-152P-201ENST00000384037 107 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 MIR130B-202ENST00000385018 82 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
SSX3Q99909 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX3Q99909 TRIM60P13-201ENST00000432350 1283 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 AC073410.1-201ENST00000435125 589 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 CACYBPP1-201ENST00000438592 684 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 DNAJA1P5-201ENST00000440278 943 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.95□□□□□ -1.62
SSX3Q99909 MORF4L1P4-201ENST00000450245 976 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 RPSAP39-201ENST00000467439 883 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 AL158068.1-201ENST00000506116 616 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX3Q99909 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX3Q99909 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX3Q99909 OR4V1P-201ENST00000525394 1140 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 RPA2P3-201ENST00000533268 770 ntBASIC4.95□□□□□ -1.62
SSX3Q99909 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SSX3Q99909 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX3Q99909 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX3Q99909 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX3Q99909 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 974.6 ms