Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.09□□□□□ -1.11
PHOX2BQ99453 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
PHOX2BQ99453 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PHOX2BQ99453 AC092162.3-201ENST00000624511 1624 ntBASIC8.09□□□□□ -1.11
PHOX2BQ99453 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PHOX2BQ99453 EEF1A1P16-201ENST00000325349 1414 ntBASIC8.09□□□□□ -1.11
PHOX2BQ99453 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
PHOX2BQ99453 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
PHOX2BQ99453 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PHOX2BQ99453 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PHOX2BQ99453 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
PHOX2BQ99453 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.09□□□□□ -1.11
PHOX2BQ99453 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.09□□□□□ -1.11
PHOX2BQ99453 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PHOX2BQ99453 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC8.09□□□□□ -1.11
PHOX2BQ99453 MTND5P16-201ENST00000460269 1703 ntBASIC8.09□□□□□ -1.11
PHOX2BQ99453 AL136140.2-201ENST00000624717 1705 ntBASIC8.09□□□□□ -1.11
PHOX2BQ99453 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC8.09□□□□□ -1.12
PHOX2BQ99453 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.12
PHOX2BQ99453 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
PHOX2BQ99453 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 CAST-244ENST00000515663 1473 ntTSL 2 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 HMGB3P1-201ENST00000393368 573 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 AL590290.1-201ENST00000405336 380 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 CBX1P3-201ENST00000413296 527 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 HCG21-204ENST00000419481 605 ntTSL 3 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 Z82198.3-201ENST00000421145 199 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 RPEP2-201ENST00000432149 701 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC105052.2-201ENST00000434317 794 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC064862.5-201ENST00000440618 334 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC084878.1-201ENST00000480555 648 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 APOBEC3AP1-201ENST00000511396 287 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC091839.1-201ENST00000513087 269 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 TRMT10BP1-201ENST00000519377 943 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 IGKV2D-10-201ENST00000520194 281 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 HIGD1AP6-201ENST00000521833 279 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 AL355836.1-201ENST00000555951 870 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 RN7SL753P-201ENST00000581238 290 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 BNIP3P15-201ENST00000604600 301 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC008966.2-201ENST00000606157 453 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC015819.1-201ENST00000613588 663 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 FAM27E3-202ENST00000614611 340 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 LINC00622-201ENST00000562811 1570 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC091305.2-201ENST00000624049 1576 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 LINC02035-201ENST00000610128 5476 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 AL158206.1-201ENST00000563205 1965 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 MAPK10-279ENST00000641157 2449 ntBASIC8.08□□□□□ -1.12
PHOX2BQ99453 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PHOX2BQ99453 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PHOX2BQ99453 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 AC073349.2-201ENST00000427545 1603 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 ITPRIPL1-201ENST00000361124 4295 ntBASIC8.07□□□□□ -1.12
PHOX2BQ99453 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
PHOX2BQ99453 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PHOX2BQ99453 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms