Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC138907.8-201ENST00000623981 2256 ntBASIC5.69□□□□□ -1.5
RPRD1AQ96P16 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.69□□□□□ -1.5
RPRD1AQ96P16 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 SNORA51.1-201ENST00000363243 140 ntBASIC5.69□□□□□ -1.5
RPRD1AQ96P16 RNA5SP234-201ENST00000363916 119 ntBASIC5.69□□□□□ -1.5
RPRD1AQ96P16 AL445213.1-201ENST00000412589 747 ntBASIC5.69□□□□□ -1.5
RPRD1AQ96P16 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 EIF1P7-201ENST00000487533 337 ntBASIC5.69□□□□□ -1.5
RPRD1AQ96P16 RN7SL547P-201ENST00000490793 290 ntBASIC5.69□□□□□ -1.5
RPRD1AQ96P16 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 AC111000.5-201ENST00000506559 1178 ntBASIC5.69□□□□□ -1.5
RPRD1AQ96P16 AC011411.1-201ENST00000509592 876 ntBASIC5.69□□□□□ -1.5
RPRD1AQ96P16 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 AP001357.1-201ENST00000586304 1053 ntBASIC5.69□□□□□ -1.5
RPRD1AQ96P16 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPRD1AQ96P16 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 RN7SKP160-201ENST00000363804 340 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 GABARAPL3-201ENST00000412799 354 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 RPL7P56-201ENST00000429441 717 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 FTLP19-201ENST00000433300 394 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 IGBP1P3-201ENST00000447449 1000 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 AC007386.1-201ENST00000455212 582 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 SIAH1P1-201ENST00000479411 923 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 DEFB109A-201ENST00000482450 265 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 AC108693.1-201ENST00000496068 432 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 ATP5LP3-201ENST00000514223 304 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 AC078878.1-201ENST00000539832 958 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 AP005403.1-201ENST00000579720 229 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 SUGT1P3-202ENST00000604259 383 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 AC007204.2-201ENST00000615022 616 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 AC027279.1-201ENST00000568885 4284 ntBASIC5.68□□□□□ -1.5
RPRD1AQ96P16 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
RPRD1AQ96P16 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 CASC19-260ENST00000641828 2001 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 HSPA8P14-201ENST00000552265 1805 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 MAPK10-338ENST00000641647 3362 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 RN7SKP59-201ENST00000410520 314 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 SMC4P1-201ENST00000414479 527 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 RIMKLBP2-201ENST00000424737 654 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AC091544.1-201ENST00000484702 348 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 GLUD1P3-202ENST00000508551 200 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms