Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL138820.1-201ENST00000617901 5305 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 PARP4P2-201ENST00000446672 3326 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC096921.2-201ENST00000561507 1916 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC011416.1-201ENST00000514947 1732 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS50Q96JG6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS50Q96JG6 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 MTCO1P28-201ENST00000574177 1528 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS50Q96JG6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS50Q96JG6 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS50Q96JG6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AL035422.1-201ENST00000414193 397 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 USP12PY-201ENST00000427677 1064 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC114973.1-201ENST00000429057 632 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC004854.1-201ENST00000440356 349 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 GTF2IP14-201ENST00000441415 586 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 RPL32P14-201ENST00000463196 378 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 LSM3P4-201ENST00000502948 309 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC090568.1-201ENST00000509499 856 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 HMGN1P17-201ENST00000513734 295 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 OR56A7P-201ENST00000524865 941 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 AL049838.1-201ENST00000563647 981 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC106730.2-201ENST00000566641 540 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS50Q96JG6 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 AC073488.6-201ENST00000632293 754 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 MIR1910-201ENST00000636955 80 ntBASIC5.9□□□□□ -1.46
VPS50Q96JG6 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS50Q96JG6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS50Q96JG6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS50Q96JG6 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS50Q96JG6 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.9□□□□□ -1.47
VPS50Q96JG6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
VPS50Q96JG6 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VPS50Q96JG6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VPS50Q96JG6 TCP1P3-201ENST00000414406 1498 ntBASIC5.9□□□□□ -1.47
VPS50Q96JG6 AP001541.1-201ENST00000623322 1904 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 OR9K1P-202ENST00000641111 3217 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 RNU6-1257P-201ENST00000384625 110 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC004386.1-201ENST00000393214 761 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC079807.1-201ENST00000429993 481 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 CCRL1P1-201ENST00000449542 1053 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC098847.1-201ENST00000473094 348 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 NPM1P29-201ENST00000483112 803 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC008945.1-201ENST00000505144 499 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC114322.1-201ENST00000506771 926 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 MTND1P24-201ENST00000552175 861 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 NPM1P42-201ENST00000560329 862 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC084759.1-201ENST00000561168 290 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms