Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PRELID3BP8-201ENST00000604148 295 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC011816.2-201ENST00000607089 556 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC015982.1-201ENST00000608113 465 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 MIR6071-201ENST00000616741 78 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 MIR6849-201ENST00000618543 69 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC073593.1-201ENST00000624500 411 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 MTCO1P12-201ENST00000414273 1543 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 CDY4P-201ENST00000418290 1513 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC073349.2-201ENST00000427545 1603 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 RNU4-81P-201ENST00000363561 144 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 RNA5SP141-201ENST00000364543 120 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 RNU6-74P-201ENST00000384235 107 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 RNU6-1026P-201ENST00000384465 108 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 RNU6-1263P-201ENST00000384601 106 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 RN7SKP139-201ENST00000410411 293 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 MTND3P8-201ENST00000412909 339 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 NENFP1-201ENST00000419476 466 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 MTCO2P27-201ENST00000420740 428 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 ISCA1P6-201ENST00000427740 390 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 FO393419.3-201ENST00000428741 282 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AL512882.1-201ENST00000436086 832 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 HMGB1P18-201ENST00000438801 619 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AL590365.1-201ENST00000450788 243 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 RPS16P9-201ENST00000477220 427 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC087385.2-201ENST00000477729 498 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC079594.1-201ENST00000489757 331 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 KCTD9P6-201ENST00000522306 950 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC023050.3-201ENST00000541142 333 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 SCOCP1-201ENST00000554676 349 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC004852.1-201ENST00000605206 154 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AC004890.3-201ENST00000605566 1095 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 ATM-228ENST00000639240 498 ntTSL 5 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 ELL2P4-201ENST00000446870 1376 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 CKAP2P1-201ENST00000555477 2049 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 AL353807.3-201ENST00000500626 2505 ntBASIC8.32□□□□□ -1.08
LRCH3Q96II8 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
LRCH3Q96II8 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LRCH3Q96II8 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms