Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC7.35□□□□□ -1.23
HPS1Q92902 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC7.35□□□□□ -1.23
HPS1Q92902 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.35□□□□□ -1.23
HPS1Q92902 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC7.35□□□□□ -1.23
HPS1Q92902 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 RNU6-543P-201ENST00000362576 108 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 Y_RNA.176-201ENST00000363815 109 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 RNY4P36-201ENST00000391116 96 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 MTND4LP17-201ENST00000414607 293 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 RPL7L1P12-201ENST00000417594 729 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC005033.1-201ENST00000428904 813 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 Z68868.1-201ENST00000429048 544 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 RPS23P8-201ENST00000429775 330 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 RPL31P35-201ENST00000431058 377 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.35□□□□□ -1.23
HPS1Q92902 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC7.35□□□□□ -1.23
HPS1Q92902 SKP1P1-201ENST00000438081 489 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC7.35□□□□□ -1.23
HPS1Q92902 AL137792.2-201ENST00000443484 235 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC012512.1-201ENST00000446594 718 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.35□□□□□ -1.23
HPS1Q92902 YWHAEP1-201ENST00000453697 763 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 MED28P8-201ENST00000454831 521 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 CHIAP1-201ENST00000456220 995 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.35□□□□□ -1.23
HPS1Q92902 RPS4XP17-201ENST00000479057 754 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
HPS1Q92902 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 RN7SL130P-201ENST00000489463 305 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC7.35□□□□□ -1.23
HPS1Q92902 AC068531.1-201ENST00000502398 195 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC025674.1-201ENST00000507074 324 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC7.35□□□□□ -1.23
HPS1Q92902 SMURF2P1-201ENST00000514992 481 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.35□□□□□ -1.23
HPS1Q92902 RNU4-49P-201ENST00000516080 140 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 RNA5SP216-201ENST00000516111 123 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 RNA5SP460-201ENST00000516789 100 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 SNORA25.17-201ENST00000517184 124 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 KCTD9P6-201ENST00000522306 950 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AP002469.1-201ENST00000526011 1043 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.35□□□□□ -1.23
HPS1Q92902 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.35□□□□□ -1.23
HPS1Q92902 MIR4680-201ENST00000580906 66 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC010327.2-201ENST00000587647 488 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.35□□□□□ -1.23
HPS1Q92902 AC090950.1-201ENST00000604625 830 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 BNIP3P4-201ENST00000604946 565 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC018462.2-201ENST00000605375 395 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AC004696.1-201ENST00000614345 607 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC7.35□□□□□ -1.23
HPS1Q92902 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
HPS1Q92902 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
HPS1Q92902 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
HPS1Q92902 DLD-205ENST00000440410 1993 ntTSL 2 BASIC7.35□□□□□ -1.23
HPS1Q92902 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.35□□□□□ -1.23
HPS1Q92902 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HPS1Q92902 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.35□□□□□ -1.23
HPS1Q92902 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
HPS1Q92902 AC055716.2-201ENST00000552545 2441 ntBASIC7.35□□□□□ -1.23
HPS1Q92902 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
HPS1Q92902 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HPS1Q92902 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HPS1Q92902 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HPS1Q92902 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.34□□□□□ -1.23
HPS1Q92902 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HPS1Q92902 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HPS1Q92902 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC7.34□□□□□ -1.23
HPS1Q92902 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HPS1Q92902 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HPS1Q92902 AC117409.1-201ENST00000470499 1310 ntBASIC7.34□□□□□ -1.23
HPS1Q92902 OR2AH1P-202ENST00000641232 2744 ntBASIC7.34□□□□□ -1.23
HPS1Q92902 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HPS1Q92902 RIOK3P1-201ENST00000418778 1528 ntBASIC7.34□□□□□ -1.23
HPS1Q92902 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HPS1Q92902 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.34□□□□□ -1.23
HPS1Q92902 OR11H4-201ENST00000315409 1082 ntBASIC7.34□□□□□ -1.23
HPS1Q92902 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HPS1Q92902 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.34□□□□□ -1.23
HPS1Q92902 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC7.34□□□□□ -1.23
HPS1Q92902 OR11H13P-201ENST00000359695 979 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms