Protein–RNA interactions for Protein: Q92575

UBXN4, UBX domain-containing protein 4, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4Q92575 MTCO2P21-201ENST00000419780 677 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.94□□□□□ -1.3
UBXN4Q92575 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.94□□□□□ -1.3
UBXN4Q92575 PPIAP13-201ENST00000434706 478 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AL356133.1-201ENST00000444762 372 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.94□□□□□ -1.3
UBXN4Q92575 SNX18P26-201ENST00000458433 740 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.94□□□□□ -1.3
UBXN4Q92575 RPSAP48-201ENST00000466509 889 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AC022730.1-201ENST00000473114 568 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UBXN4Q92575 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AC114940.1-201ENST00000512162 1265 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AC112673.1-201ENST00000513168 575 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AC044913.1-201ENST00000557200 430 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.94□□□□□ -1.3
UBXN4Q92575 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.94□□□□□ -1.3
UBXN4Q92575 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.94□□□□□ -1.3
UBXN4Q92575 RN7SL270P-201ENST00000579643 281 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 MIR5708-201ENST00000579723 85 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AC233702.7-202ENST00000582941 211 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.94□□□□□ -1.3
UBXN4Q92575 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.94□□□□□ -1.3
UBXN4Q92575 RPS27AP19-201ENST00000597285 458 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.94□□□□□ -1.3
UBXN4Q92575 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AL020997.3-201ENST00000602843 359 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AC092032.1-201ENST00000603090 165 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.94□□□□□ -1.3
UBXN4Q92575 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AC099676.1-201ENST00000608886 657 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 AC093388.1-201ENST00000609166 430 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.94□□□□□ -1.3
UBXN4Q92575 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
UBXN4Q92575 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.94□□□□□ -1.3
UBXN4Q92575 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.94□□□□□ -1.3
UBXN4Q92575 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.94□□□□□ -1.3
UBXN4Q92575 CDRT1-208ENST00000630868 794 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 MIR665-201ENST00000635949 72 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 LINC02211-204ENST00000642024 1070 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UBXN4Q92575 WDR95P-201ENST00000425638 1542 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
UBXN4Q92575 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UBXN4Q92575 AC140134.1-201ENST00000511830 3544 ntBASIC6.94□□□□□ -1.3
UBXN4Q92575 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
UBXN4Q92575 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UBXN4Q92575 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
UBXN4Q92575 PWAR1-201ENST00000624188 2414 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
UBXN4Q92575 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UBXN4Q92575 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.93□□□□□ -1.3
UBXN4Q92575 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.93□□□□□ -1.3
UBXN4Q92575 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UBXN4Q92575 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UBXN4Q92575 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UBXN4Q92575 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
UBXN4Q92575 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UBXN4Q92575 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
UBXN4Q92575 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UBXN4Q92575 RN7SKP59-201ENST00000410520 314 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 SLC20A1P1-201ENST00000413906 956 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 OR4K6P-201ENST00000416478 897 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 AC234782.4-201ENST00000417646 1048 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 RPL23AP85-201ENST00000421838 433 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.93□□□□□ -1.3
UBXN4Q92575 CYCSP52-201ENST00000422857 310 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 KCTD9P1-201ENST00000430462 1167 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.93□□□□□ -1.3
UBXN4Q92575 AC079922.1-201ENST00000443291 359 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.93□□□□□ -1.3
UBXN4Q92575 AL022237.1-201ENST00000446663 358 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 AC103563.5-201ENST00000455643 364 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 NMNAT1P3-201ENST00000457517 888 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 WBP1LP1-201ENST00000460451 896 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.93□□□□□ -1.3
UBXN4Q92575 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.93□□□□□ -1.3
UBXN4Q92575 AC093325.1-201ENST00000508378 326 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UBXN4Q92575 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.93□□□□□ -1.3
UBXN4Q92575 RNA5SP278-201ENST00000517055 102 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.93□□□□□ -1.3
UBXN4Q92575 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.93□□□□□ -1.3
UBXN4Q92575 AC107952.1-201ENST00000524200 376 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.93□□□□□ -1.3
UBXN4Q92575 AP001803.1-201ENST00000525668 147 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 AC130366.1-201ENST00000526505 1192 ntBASIC6.93□□□□□ -1.3
UBXN4Q92575 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.93□□□□□ -1.3
UBXN4Q92575 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms