Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC017079.1-201ENST00000333650 415 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 RPL21P67-201ENST00000402896 478 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AL133260.1-201ENST00000405720 405 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AL009179.1-201ENST00000406085 265 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 RN7SKP247-201ENST00000411094 308 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC126120.1-201ENST00000431082 470 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC090018.1-201ENST00000434369 367 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 UBE2V2P1-201ENST00000434717 398 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 RBMY2TP-201ENST00000451162 947 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AL122020.1-201ENST00000472287 459 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC098847.1-201ENST00000473094 348 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 UBFD1P1-201ENST00000473259 814 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC073610.1-201ENST00000489971 396 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC122714.1-201ENST00000502510 459 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 CCNHP1-201ENST00000513311 678 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 HMGN1P17-201ENST00000513734 295 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 TRIM51DP-201ENST00000529746 596 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 TRAV11-201ENST00000539512 339 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AP002373.2-201ENST00000541631 1060 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 RPA2P1-201ENST00000556557 721 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC009303.3-201ENST00000591103 736 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 BNIP3P41-202ENST00000616656 861 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC007204.1-201ENST00000621794 555 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AL136228.1-201ENST00000622221 319 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC243960.7-201ENST00000623532 707 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC71LQ8N9Z2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 BX119321.1-201ENST00000428912 797 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 HSPD1P12-201ENST00000429127 1069 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 HMGB1P7-201ENST00000450921 612 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 FCF1P7-201ENST00000451185 558 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 CFL1P4-201ENST00000451536 498 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 Z83820.1-201ENST00000456978 1499 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms