Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AL078621.3-201ENST00000623707 2042 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 RNA5SP284-201ENST00000384547 118 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 DBIP1-201ENST00000401435 260 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 BMS1P17-202ENST00000416720 316 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 RPL19P16-201ENST00000433839 588 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 SUMO2P3-201ENST00000438311 288 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AL672138.1-201ENST00000450604 1015 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AC092754.1-201ENST00000472975 479 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AC091544.1-201ENST00000484702 348 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 RPS24P16-201ENST00000497294 392 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AC138409.2-202ENST00000507274 458 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 SCARNA16.4-201ENST00000516956 187 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 RN7SKP99-201ENST00000517028 307 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 NMNAT1P5-201ENST00000559657 841 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AC109583.2-201ENST00000617367 129 ntBASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CDKL3Q8IVW4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 NR1H5P-201ENST00000452683 1377 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 RNU1-19P-201ENST00000363306 165 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 RN7SKP292-201ENST00000365522 317 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 RNA5SP122-201ENST00000384457 108 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 CBX1P3-201ENST00000413296 527 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 TNPO1P1-201ENST00000423641 1138 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC090018.1-201ENST00000434369 367 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC019185.1-201ENST00000442718 389 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC090804.1-201ENST00000448870 490 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC090888.3-201ENST00000558917 509 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 RN7SL356P-201ENST00000582228 248 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC027243.2-201ENST00000602530 724 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC009027.1-201ENST00000604510 479 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 CU639417.4-201ENST00000623928 207 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC099654.6-201ENST00000636487 512 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 MUC2-202ENST00000613187 4845 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC010266.2-201ENST00000564741 3255 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC079298.1-201ENST00000625026 1619 ntBASIC5.56□□□□□ -1.52
CDKL3Q8IVW4 AC005005.4-201ENST00000623789 16698 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms