Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 NANOGP3-201ENST00000605855 286 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC003001.2-201ENST00000616294 831 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC009032.1-201ENST00000617574 431 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC026367.3-201ENST00000619032 590 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC004808.2-201ENST00000627965 773 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC022417.1-201ENST00000624768 1303 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 CASC19-284ENST00000642142 1868 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AP005435.3-201ENST00000531260 3198 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 TMSB4XP2-201ENST00000335179 210 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC126120.1-201ENST00000431082 470 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 MTND2P2-201ENST00000434633 945 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC093716.1-201ENST00000435923 377 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC096775.1-201ENST00000437724 448 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 RPS12P17-201ENST00000438591 377 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 NPM1P19-201ENST00000450070 712 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 RSU1P1-201ENST00000453416 441 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC068305.2-201ENST00000550567 1205 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC091078.2-201ENST00000557145 559 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC092121.1-201ENST00000569452 202 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 GARSP1-201ENST00000570895 719 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 COX6CP7-201ENST00000597056 208 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 BMS1P7-201ENST00000602440 1052 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 FAM27E4-201ENST00000605259 342 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 MIR6861-201ENST00000618657 64 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 AL359742.1-201ENST00000622497 540 ntBASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NUP54Q7Z3B4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.4□□□□□ -1.55
NUP54Q7Z3B4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NUP54Q7Z3B4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NUP54Q7Z3B4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
NUP54Q7Z3B4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
NUP54Q7Z3B4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.4□□□□□ -1.55
NUP54Q7Z3B4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 AL355488.2-201ENST00000609909 2850 ntBASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 WDR95P-201ENST00000425638 1542 ntBASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 AC093671.1-201ENST00000624981 2929 ntBASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 RPL11P3-201ENST00000395256 523 ntBASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 RNA5SP296-201ENST00000410523 111 ntBASIC5.39□□□□□ -1.55
NUP54Q7Z3B4 NPM1P40-201ENST00000412758 733 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms