Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTR9Q6PD62 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.59□□□□□ -1.36
CTR9Q6PD62 RARSP1-201ENST00000542842 1418 ntBASIC6.59□□□□□ -1.36
CTR9Q6PD62 AL158152.1-201ENST00000602652 1435 ntBASIC6.59□□□□□ -1.36
CTR9Q6PD62 HSPD1P7-201ENST00000447985 1686 ntBASIC6.58□□□□□ -1.36
CTR9Q6PD62 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTR9Q6PD62 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 AL449283.1-201ENST00000602631 3403 ntBASIC6.58□□□□□ -1.36
CTR9Q6PD62 MT-RNR2-201ENST00000387347 1559 ntBASIC6.58□□□□□ -1.36
CTR9Q6PD62 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTR9Q6PD62 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTR9Q6PD62 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTR9Q6PD62 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 AC009804.1-201ENST00000400949 179 ntBASIC6.58□□□□□ -1.36
CTR9Q6PD62 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTR9Q6PD62 CYCSP12-201ENST00000437729 300 ntBASIC6.58□□□□□ -1.36
CTR9Q6PD62 AC092106.1-201ENST00000444291 373 ntBASIC6.58□□□□□ -1.36
CTR9Q6PD62 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTR9Q6PD62 BX510359.5-201ENST00000515651 304 ntBASIC6.58□□□□□ -1.36
CTR9Q6PD62 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTR9Q6PD62 AC078878.1-201ENST00000539832 958 ntBASIC6.58□□□□□ -1.36
CTR9Q6PD62 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 AC000068.2-201ENST00000608816 460 ntBASIC6.58□□□□□ -1.36
CTR9Q6PD62 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTR9Q6PD62 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTR9Q6PD62 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.58□□□□□ -1.36
CTR9Q6PD62 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 AL137058.3-201ENST00000624531 3099 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 U3.10-201ENST00000364459 214 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 RPSAP35-201ENST00000413753 818 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 RPL35AP24-201ENST00000413846 330 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 Z93019.1-201ENST00000416450 973 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 RN7SL51P-201ENST00000468230 285 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 OR4A43P-201ENST00000532938 908 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 IMMP1LP3-201ENST00000604197 224 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 AC069542.2-201ENST00000624816 216 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 AC136428.4-201ENST00000634254 1155 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 CR788268.1-201ENST00000603931 1809 ntBASIC6.57□□□□□ -1.36
CTR9Q6PD62 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CTR9Q6PD62 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTR9Q6PD62 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CTR9Q6PD62 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CTR9Q6PD62 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.56□□□□□ -1.36
CTR9Q6PD62 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CTR9Q6PD62 AC018809.2-201ENST00000602436 3823 ntBASIC6.56□□□□□ -1.36
CTR9Q6PD62 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.56□□□□□ -1.36
CTR9Q6PD62 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTR9Q6PD62 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CTR9Q6PD62 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTR9Q6PD62 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTR9Q6PD62 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.56□□□□□ -1.36
CTR9Q6PD62 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CTR9Q6PD62 Z68694.1-201ENST00000413929 841 ntBASIC6.56□□□□□ -1.36
CTR9Q6PD62 MARK2P12-201ENST00000420129 585 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms