Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AP000534.2-201ENST00000412729 568 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 AC080125.1-201ENST00000414888 684 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 CHEK2P3-201ENST00000416118 248 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 AL589872.1-201ENST00000426602 288 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 AC005033.1-201ENST00000428904 813 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 RPS17P8-201ENST00000434525 335 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 RPL21P23-201ENST00000446654 460 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 TAAR3P-201ENST00000466706 1078 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 AC109454.1-201ENST00000471205 498 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 RN7SL416P-201ENST00000494042 298 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 TTC39CP1-201ENST00000512513 755 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 AC114801.1-201ENST00000512633 297 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 RNA5SP75-201ENST00000516841 111 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 NDFIP1P1-201ENST00000543144 525 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 BNIP3P6-201ENST00000549284 499 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 RN7SL840P-201ENST00000606883 284 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 MIR8075-201ENST00000614354 80 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 AL606760.4-201ENST00000617613 718 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 AC093616.1-201ENST00000427434 2095 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VARS2Q5ST30 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VARS2Q5ST30 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VARS2Q5ST30 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VARS2Q5ST30 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC138207.6-201ENST00000579164 1967 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 GC-208ENST00000513476 1567 ntTSL 5 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 Y_RNA.60-201ENST00000362831 98 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 Y_RNA.150-201ENST00000363562 102 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 Y_RNA.301-201ENST00000364990 103 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 RN7SKP47-201ENST00000365347 328 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 RNVU1-15-201ENST00000384476 165 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 RNU6-1263P-201ENST00000384601 106 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 NHP2P2-201ENST00000396362 460 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC121334.1-201ENST00000396414 802 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 AL583835.1-201ENST00000399570 407 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 VIM2P-201ENST00000402383 1294 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 RN7SKP85-201ENST00000411349 318 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 NPM1P34-201ENST00000428821 893 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 AL645936.1-201ENST00000441979 518 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC002553.1-201ENST00000442828 802 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 PRELID3BP1-201ENST00000457142 540 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 RNU6-1132P-201ENST00000459214 107 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 MIR2053-201ENST00000459295 91 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 MTND5P4-201ENST00000514978 288 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 RNU6-943P-201ENST00000516960 98 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 SUB1P1-201ENST00000524415 382 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 GTF2IP11-201ENST00000526931 420 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 OR4P1P-201ENST00000530808 1136 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 MAL2-203ENST00000534619 578 ntTSL 4 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC009117.1-201ENST00000563948 554 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 MIR5705-201ENST00000579870 89 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 MIR3128-201ENST00000581957 66 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC004890.3-201ENST00000605566 1095 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 AP005329.3-201ENST00000609924 686 ntBASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
VARS2Q5ST30 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms