Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LRRK2Q5S007 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC4.71□□□□□ -1.65
LRRK2Q5S007 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.71□□□□□ -1.65
LRRK2Q5S007 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.65
LRRK2Q5S007 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC4.71□□□□□ -1.65
LRRK2Q5S007 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LRRK2Q5S007 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
LRRK2Q5S007 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRK2Q5S007 CASC19-260ENST00000641828 2001 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 POT1-202ENST00000393329 3950 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRK2Q5S007 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 AC073581.1-201ENST00000519036 575 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 AC069366.1-201ENST00000583159 838 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 AC006130.2-201ENST00000586202 326 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRK2Q5S007 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRK2Q5S007 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRK2Q5S007 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 FAM3C2-201ENST00000312214 681 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 RN7SKP145-201ENST00000363291 303 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 RNA5SP455-201ENST00000365190 119 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 U3.22-201ENST00000391120 215 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 GAPDHP15-201ENST00000398586 975 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRK2Q5S007 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 CYP4F27P-201ENST00000514557 494 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRK2Q5S007 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 MIR3667-201ENST00000581025 74 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 RN7SL356P-201ENST00000582228 248 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 AL445423.1-201ENST00000609941 536 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 AL445647.2-201ENST00000615170 130 ntBASIC4.71□□□□□ -1.66
LRRK2Q5S007 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRK2Q5S007 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC4.71□□□□□ -1.66
LRRK2Q5S007 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 RNA5SP332-201ENST00000391063 115 ntBASIC4.7□□□□□ -1.66
LRRK2Q5S007 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.7□□□□□ -1.66
LRRK2Q5S007 RPL7L1P3-201ENST00000455249 689 ntBASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 MRPS33P2-201ENST00000507850 322 ntBASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC007559.1-201ENST00000428736 355 ntBASIC4.7□□□□□ -1.66
LRRK2Q5S007 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC011005.3-201ENST00000491624 395 ntBASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.7□□□□□ -1.66
LRRK2Q5S007 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRK2Q5S007 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC4.7□□□□□ -1.66
LRRK2Q5S007 MTCO1P15-201ENST00000529569 1526 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms