Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RNU1-77P-201ENST00000390868 162 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AL512422.1-201ENST00000407033 553 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AL354766.1-201ENST00000423396 542 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC017019.1-201ENST00000426129 261 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 DSTNP5-201ENST00000427921 523 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 RPL5P2-201ENST00000429598 854 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC090804.1-201ENST00000448870 490 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC105420.1-201ENST00000504389 582 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC021193.1-201ENST00000511607 420 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 CDC42P3-201ENST00000518493 633 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 NPM1P5-201ENST00000557228 838 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC005341.1-201ENST00000571086 708 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC060766.1-201ENST00000590824 627 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 AC109583.2-201ENST00000617367 129 ntBASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN20Q4JDL3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 U3.25-201ENST00000391209 220 ntBASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 CYCSP12-201ENST00000437729 300 ntBASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 RPS26P41-201ENST00000450370 284 ntBASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC104634.1-201ENST00000452720 462 ntBASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 RPL7P45-201ENST00000455851 743 ntBASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC093827.1-201ENST00000480094 861 ntBASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC126177.5-201ENST00000549599 178 ntBASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC012146.2-201ENST00000576545 416 ntBASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC009027.1-201ENST00000604510 479 ntBASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.65□□□□□ -1.5
PTPN20Q4JDL3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN20Q4JDL3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AC026523.2-201ENST00000625039 7739 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 MIR323A-201ENST00000362199 86 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 RNA5SP339-201ENST00000390987 122 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 NACAP7-201ENST00000407371 609 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 RNA5SP487-201ENST00000410186 122 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AL390774.1-201ENST00000411924 246 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 RPL7AP49-201ENST00000429522 581 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AL591438.1-201ENST00000433508 581 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AC007386.1-201ENST00000455212 582 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AL136038.1-201ENST00000497246 351 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AC092709.1-201ENST00000521355 1045 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms