Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RN7SKP292-201ENST00000365522 317 ntBASIC5.35□□□□□ -1.55
LTBQ06643 RNU6-152P-201ENST00000384037 107 ntBASIC5.35□□□□□ -1.55
LTBQ06643 RNU6-584P-201ENST00000410350 95 ntBASIC5.35□□□□□ -1.55
LTBQ06643 RN7SKP293-201ENST00000411389 296 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.35□□□□□ -1.55
LTBQ06643 AL445528.1-201ENST00000426330 420 ntBASIC5.35□□□□□ -1.55
LTBQ06643 USP12PY-201ENST00000427677 1064 ntBASIC5.35□□□□□ -1.55
LTBQ06643 MTND4LP14-201ENST00000429447 288 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.35□□□□□ -1.55
LTBQ06643 AC073410.1-201ENST00000435125 589 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AL445928.1-201ENST00000435545 222 ntBASIC5.35□□□□□ -1.55
LTBQ06643 HMGN1P5-201ENST00000448591 263 ntBASIC5.35□□□□□ -1.55
LTBQ06643 MORF4L1P4-201ENST00000450245 976 ntBASIC5.35□□□□□ -1.55
LTBQ06643 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.35□□□□□ -1.55
LTBQ06643 CLIC4P1-201ENST00000453177 535 ntBASIC5.35□□□□□ -1.55
LTBQ06643 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 AC011476.1-201ENST00000466725 307 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AC090589.1-201ENST00000473109 362 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBQ06643 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 RPS3AP6-201ENST00000484430 795 ntBASIC5.35□□□□□ -1.55
LTBQ06643 RPL38P3-201ENST00000484463 213 ntBASIC5.35□□□□□ -1.55
LTBQ06643 EIF3LP3-201ENST00000495197 822 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AC008629.2-201ENST00000503783 483 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.35□□□□□ -1.55
LTBQ06643 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.35□□□□□ -1.55
LTBQ06643 AC117525.1-201ENST00000515228 503 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AC016550.3-201ENST00000515706 767 ntBASIC5.35□□□□□ -1.55
LTBQ06643 RNA5SP362-201ENST00000516048 118 ntBASIC5.35□□□□□ -1.55
LTBQ06643 snoU109.5-201ENST00000516231 132 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AP003396.4-201ENST00000527574 265 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AC113192.3-201ENST00000529152 742 ntBASIC5.35□□□□□ -1.55
LTBQ06643 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LTBQ06643 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBQ06643 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.35□□□□□ -1.55
LTBQ06643 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.35□□□□□ -1.55
LTBQ06643 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.35□□□□□ -1.55
LTBQ06643 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.35□□□□□ -1.55
LTBQ06643 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.35□□□□□ -1.55
LTBQ06643 AC044860.2-201ENST00000561005 179 ntBASIC5.35□□□□□ -1.55
LTBQ06643 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBQ06643 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.35□□□□□ -1.55
LTBQ06643 AC092121.1-201ENST00000569452 202 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.35□□□□□ -1.55
LTBQ06643 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.35□□□□□ -1.55
LTBQ06643 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.35□□□□□ -1.55
LTBQ06643 SUMO2P15-201ENST00000604285 278 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AL451064.1-201ENST00000607718 471 ntBASIC5.35□□□□□ -1.55
LTBQ06643 AC018690.1-201ENST00000608144 626 ntBASIC5.35□□□□□ -1.55
LTBQ06643 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 AL136228.1-201ENST00000622221 319 ntBASIC5.35□□□□□ -1.55
LTBQ06643 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBQ06643 AL109659.3-201ENST00000624985 950 ntBASIC5.35□□□□□ -1.55
LTBQ06643 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBQ06643 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBQ06643 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBQ06643 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LTBQ06643 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBQ06643 AC140134.1-201ENST00000511830 3544 ntBASIC5.35□□□□□ -1.55
LTBQ06643 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.35□□□□□ -1.55
LTBQ06643 AL355834.1-201ENST00000556602 3965 ntBASIC5.34□□□□□ -1.55
LTBQ06643 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LTBQ06643 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
LTBQ06643 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBQ06643 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBQ06643 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBQ06643 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LTBQ06643 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LTBQ06643 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LTBQ06643 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBQ06643 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBQ06643 AC099677.3-201ENST00000427081 395 ntBASIC5.34□□□□□ -1.55
LTBQ06643 MRPS33P4-201ENST00000434892 317 ntBASIC5.34□□□□□ -1.55
LTBQ06643 AC013410.1-201ENST00000436223 1232 ntBASIC5.34□□□□□ -1.55
LTBQ06643 GAPDHP58-201ENST00000438477 1006 ntBASIC5.34□□□□□ -1.55
LTBQ06643 KRT8P51-201ENST00000438938 274 ntBASIC5.34□□□□□ -1.55
LTBQ06643 AL663074.2-201ENST00000440621 479 ntBASIC5.34□□□□□ -1.55
LTBQ06643 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 OR6C72P-201ENST00000451403 892 ntBASIC5.34□□□□□ -1.55
LTBQ06643 OSTCP1-201ENST00000455507 450 ntBASIC5.34□□□□□ -1.55
LTBQ06643 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.34□□□□□ -1.55
LTBQ06643 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LTBQ06643 PFN1P6-201ENST00000476786 399 ntBASIC5.34□□□□□ -1.55
LTBQ06643 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBQ06643 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBQ06643 NDUFB5P1-201ENST00000508134 564 ntBASIC5.34□□□□□ -1.55
LTBQ06643 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LTBQ06643 MIR2117-201ENST00000516780 80 ntBASIC5.34□□□□□ -1.55
LTBQ06643 Y_RNA.717-201ENST00000517106 92 ntBASIC5.34□□□□□ -1.55
LTBQ06643 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBQ06643 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
LTBQ06643 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBQ06643 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms