Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RN7SL570P-201ENST00000484405 292 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 OR5H7P-201ENST00000514084 930 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC027369.2-201ENST00000528030 440 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 PMS2P3-207ENST00000529061 717 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC122688.1-201ENST00000541494 223 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AP002373.2-201ENST00000541631 1060 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC006512.2-201ENST00000543250 486 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AL358913.1-201ENST00000554342 121 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AL356801.1-201ENST00000559320 294 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC096996.1-201ENST00000563813 325 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 DHFRP1-201ENST00000579682 559 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 MIR6889-201ENST00000613185 59 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AP001962.1-201ENST00000624114 559 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 ADAM5-202ENST00000399789 1942 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC079097.1-201ENST00000512187 1399 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 RNA5SP326-201ENST00000363209 110 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 BMS1P3-201ENST00000372011 932 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC005042.1-201ENST00000393397 800 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC069154.1-201ENST00000432914 542 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 NDUFS5P5-201ENST00000437256 321 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 EIF4E2P2-201ENST00000492033 736 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 LSM3P4-201ENST00000502948 309 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC114781.3-201ENST00000512083 142 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 Y_RNA.667-201ENST00000516212 107 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC090022.1-201ENST00000546569 311 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC026826.3-201ENST00000561747 158 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AL359091.2-201ENST00000609303 556 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC244100.4-201ENST00000617747 388 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC026367.3-201ENST00000619032 590 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AF117829.2-201ENST00000619538 361 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC006840.1-201ENST00000623069 542 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AC129778.1-202ENST00000623812 261 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AL390318.1-201ENST00000624564 687 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AL591379.1-207ENST00000635982 261 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 NEPNP-201ENST00000404786 1371 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 PWAR1-201ENST00000624188 2414 ntBASIC4.23□□□□□ -1.73
HIST1H1AQ02539 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms