Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL39P62891 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC3.7□□□□□ -1.82
RPL39P62891 AP001642.1-201ENST00000624727 2117 ntBASIC3.7□□□□□ -1.82
RPL39P62891 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RPL39P62891 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 AC126323.6-202ENST00000568092 3511 ntBASIC3.69□□□□□ -1.82
RPL39P62891 LINC01355-201ENST00000566551 5444 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AC011447.7-201ENST00000624228 1590 ntBASIC3.69□□□□□ -1.82
RPL39P62891 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 OR7E25P-201ENST00000344844 931 ntBASIC3.69□□□□□ -1.82
RPL39P62891 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RPL39P62891 RN7SKP250-201ENST00000363924 321 ntBASIC3.69□□□□□ -1.82
RPL39P62891 RN7SKP86-201ENST00000410454 332 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AC013429.2-201ENST00000418798 781 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AC113412.1-201ENST00000425840 504 ntBASIC3.69□□□□□ -1.82
RPL39P62891 RPL34P6-201ENST00000432390 345 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL39P62891 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RPL39P62891 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL39P62891 BX842559.2-201ENST00000451418 605 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL39P62891 RPS4XP12-201ENST00000461747 709 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AC058823.1-201ENST00000485315 474 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL39P62891 AC091874.2-201ENST00000505889 720 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL39P62891 HMGB3P16-201ENST00000508037 287 ntBASIC3.69□□□□□ -1.82
RPL39P62891 B4GALNT2P1-201ENST00000508857 307 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL39P62891 AC018797.1-201ENST00000510791 255 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL39P62891 RNU6-615P-201ENST00000516065 106 ntBASIC3.69□□□□□ -1.82
RPL39P62891 SNORA70.20-201ENST00000516848 126 ntBASIC3.69□□□□□ -1.82
RPL39P62891 SCARNA16.4-201ENST00000516956 187 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AC105031.1-201ENST00000518550 476 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC3.69□□□□□ -1.82
RPL39P62891 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL39P62891 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 AC121758.1-202ENST00000556917 658 ntBASIC3.69□□□□□ -1.82
RPL39P62891 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RPL39P62891 AC022001.1-201ENST00000605193 268 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL39P62891 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC3.69□□□□□ -1.82
RPL39P62891 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC3.69□□□□□ -1.82
RPL39P62891 AC015914.2-201ENST00000618167 288 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC3.69□□□□□ -1.82
RPL39P62891 AP001962.1-201ENST00000624114 559 ntBASIC3.69□□□□□ -1.82
RPL39P62891 AC008691.1-209ENST00000642094 814 ntBASIC3.69□□□□□ -1.82
RPL39P62891 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.69□□□□□ -1.82
RPL39P62891 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC3.69□□□□□ -1.82
RPL39P62891 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RPL39P62891 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 AC114786.1-201ENST00000512892 1415 ntBASIC3.69□□□□□ -1.82
RPL39P62891 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPL39P62891 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.68□□□□□ -1.82
RPL39P62891 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RPL39P62891 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RPL39P62891 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RPL39P62891 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.68□□□□□ -1.82
RPL39P62891 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RPL39P62891 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.68□□□□□ -1.82
RPL39P62891 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RPL39P62891 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.68□□□□□ -1.82
RPL39P62891 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RPL39P62891 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
RPL39P62891 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RPL39P62891 RN7SKP74-201ENST00000362849 309 ntBASIC3.68□□□□□ -1.82
RPL39P62891 RNA5SP232-201ENST00000364144 119 ntBASIC3.68□□□□□ -1.82
RPL39P62891 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC3.68□□□□□ -1.82
RPL39P62891 OR7E101P-201ENST00000400428 513 ntBASIC3.68□□□□□ -1.82
RPL39P62891 HSPA8P15-201ENST00000401676 786 ntBASIC3.68□□□□□ -1.82
RPL39P62891 HMGB1P20-201ENST00000402555 677 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AL035079.1-201ENST00000405210 287 ntBASIC3.68□□□□□ -1.82
RPL39P62891 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPL39P62891 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC3.68□□□□□ -1.82
RPL39P62891 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC3.68□□□□□ -1.82
RPL39P62891 Z82198.3-201ENST00000421145 199 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AL035660.1-201ENST00000422041 222 ntBASIC3.68□□□□□ -1.82
RPL39P62891 GSTM5P1-201ENST00000434751 660 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AL672138.1-201ENST00000450604 1015 ntBASIC3.68□□□□□ -1.82
RPL39P62891 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPL39P62891 ACA64.1-201ENST00000459171 127 ntBASIC3.68□□□□□ -1.82
RPL39P62891 RN7SL189P-201ENST00000468631 289 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AC090638.1-201ENST00000498296 909 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC3.68□□□□□ -1.82
RPL39P62891 AP000648.1-201ENST00000529682 397 ntBASIC3.68□□□□□ -1.82
RPL39P62891 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC3.68□□□□□ -1.82
RPL39P62891 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC3.68□□□□□ -1.82
RPL39P62891 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC3.68□□□□□ -1.82
RPL39P62891 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RPL39P62891 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC3.68□□□□□ -1.82
RPL39P62891 RN7SL708P-201ENST00000580952 299 ntBASIC3.68□□□□□ -1.82
RPL39P62891 RN7SL435P-201ENST00000584418 282 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms