Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AP1S1P61966 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
AP1S1P61966 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.5□□□□□ -1.53
AP1S1P61966 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
AP1S1P61966 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AP1S1P61966 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.5□□□□□ -1.53
AP1S1P61966 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
AP1S1P61966 AC005005.4-201ENST00000623789 16698 ntBASIC5.5□□□□□ -1.53
AP1S1P61966 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
AP1S1P61966 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.49□□□□□ -1.53
AP1S1P61966 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.49□□□□□ -1.53
AP1S1P61966 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.49□□□□□ -1.53
AP1S1P61966 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP1S1P61966 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP1S1P61966 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP1S1P61966 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
AP1S1P61966 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
AP1S1P61966 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.49□□□□□ -1.53
AP1S1P61966 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
AP1S1P61966 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP1S1P61966 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP1S1P61966 MIR133B-201ENST00000362210 119 ntBASIC5.49□□□□□ -1.53
AP1S1P61966 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
AP1S1P61966 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.49□□□□□ -1.53
AP1S1P61966 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.49□□□□□ -1.53
AP1S1P61966 NDUFB4P8-201ENST00000435351 367 ntBASIC5.49□□□□□ -1.53
AP1S1P61966 RN7SL197P-201ENST00000466981 299 ntBASIC5.49□□□□□ -1.53
AP1S1P61966 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.49□□□□□ -1.53
AP1S1P61966 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.49□□□□□ -1.53
AP1S1P61966 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.49□□□□□ -1.53
AP1S1P61966 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.49□□□□□ -1.53
AP1S1P61966 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.49□□□□□ -1.53
AP1S1P61966 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.49□□□□□ -1.53
AP1S1P61966 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.49□□□□□ -1.53
AP1S1P61966 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.49□□□□□ -1.53
AP1S1P61966 MIR6729-201ENST00000618194 65 ntBASIC5.49□□□□□ -1.53
AP1S1P61966 AC021766.1-201ENST00000624404 741 ntBASIC5.49□□□□□ -1.53
AP1S1P61966 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.49□□□□□ -1.53
AP1S1P61966 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
AP1S1P61966 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP1S1P61966 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP1S1P61966 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.49□□□□□ -1.53
AP1S1P61966 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.49□□□□□ -1.53
AP1S1P61966 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
AP1S1P61966 MTCO1P7-201ENST00000419523 1542 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.48□□□□□ -1.53
AP1S1P61966 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP1S1P61966 AC023632.6-201ENST00000624338 2177 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
AP1S1P61966 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.48□□□□□ -1.53
AP1S1P61966 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP1S1P61966 SNORA16A-201ENST00000384342 137 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 DBIP1-201ENST00000401435 260 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 RNA5SP487-201ENST00000410186 122 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 RN7SKP59-201ENST00000410520 314 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 NPM1P4-201ENST00000414095 812 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AL354868.1-201ENST00000417077 482 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.48□□□□□ -1.53
AP1S1P61966 BX119904.3-201ENST00000428194 957 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 RPL12P18-201ENST00000437175 325 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AL359265.1-201ENST00000440296 795 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AC023271.1-201ENST00000445936 1090 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 GAPDHP25-201ENST00000447061 1001 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AC092754.1-201ENST00000472975 479 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 EIF3LP3-201ENST00000495197 822 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.48□□□□□ -1.53
AP1S1P61966 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.48□□□□□ -1.53
AP1S1P61966 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.48□□□□□ -1.53
AP1S1P61966 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
AP1S1P61966 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.48□□□□□ -1.53
AP1S1P61966 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.48□□□□□ -1.53
AP1S1P61966 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.48□□□□□ -1.53
AP1S1P61966 HMGB1P40-201ENST00000525121 540 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AC079064.1-201ENST00000528365 362 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
AP1S1P61966 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.48□□□□□ -1.53
AP1S1P61966 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.48□□□□□ -1.53
AP1S1P61966 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.48□□□□□ -1.53
AP1S1P61966 MIR3176-201ENST00000582210 90 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 RN7SL356P-201ENST00000582228 248 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 MIR6837-201ENST00000620884 64 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AL355480.1-201ENST00000629041 99 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP1S1P61966 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
AP1S1P61966 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP1S1P61966 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP1S1P61966 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.48□□□□□ -1.53
AP1S1P61966 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP1S1P61966 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.48□□□□□ -1.53
AP1S1P61966 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
AP1S1P61966 AC092070.2-203ENST00000598377 3644 ntBASIC5.48□□□□□ -1.53
AP1S1P61966 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AP1S1P61966 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AP1S1P61966 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
AP1S1P61966 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
AP1S1P61966 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
AP1S1P61966 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.47□□□□□ -1.53
AP1S1P61966 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms