Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.85□□□□□ -1.63
VBP1P61758 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.85□□□□□ -1.63
VBP1P61758 AC022106.2-201ENST00000620114 757 ntBASIC4.85□□□□□ -1.63
VBP1P61758 MIR6839-201ENST00000620425 113 ntBASIC4.85□□□□□ -1.63
VBP1P61758 AL122023.1-201ENST00000622847 530 ntBASIC4.85□□□□□ -1.63
VBP1P61758 AP000648.2-201ENST00000624182 404 ntBASIC4.85□□□□□ -1.63
VBP1P61758 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VBP1P61758 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VBP1P61758 PSG10P-201ENST00000501199 1500 ntBASIC4.85□□□□□ -1.63
VBP1P61758 MT-RNR2-201ENST00000387347 1559 ntBASIC4.85□□□□□ -1.63
VBP1P61758 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.85□□□□□ -1.63
VBP1P61758 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.85□□□□□ -1.63
VBP1P61758 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VBP1P61758 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
VBP1P61758 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.85□□□□□ -1.63
VBP1P61758 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
VBP1P61758 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.84□□□□□ -1.63
VBP1P61758 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.84□□□□□ -1.63
VBP1P61758 AL592182.3-201ENST00000642132 3304 ntBASIC4.84□□□□□ -1.63
VBP1P61758 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
VBP1P61758 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VBP1P61758 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.84□□□□□ -1.63
VBP1P61758 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.84□□□□□ -1.63
VBP1P61758 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VBP1P61758 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VBP1P61758 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VBP1P61758 RN7SKP108-201ENST00000411367 328 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AC007738.1-201ENST00000413892 348 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AC092570.3-201ENST00000420113 693 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AL590609.2-201ENST00000421430 368 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC4.84□□□□□ -1.63
VBP1P61758 AC104843.2-201ENST00000427666 297 ntBASIC4.84□□□□□ -1.63
VBP1P61758 TUBB4BP6-201ENST00000437576 479 ntBASIC4.84□□□□□ -1.63
VBP1P61758 OR52U1P-201ENST00000439752 923 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AL136455.1-201ENST00000441083 1240 ntBASIC4.84□□□□□ -1.63
VBP1P61758 RPS7P4-201ENST00000444127 582 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.84□□□□□ -1.63
VBP1P61758 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.84□□□□□ -1.63
VBP1P61758 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.84□□□□□ -1.63
VBP1P61758 RN7SL583P-201ENST00000475692 287 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AC093827.1-201ENST00000480094 861 ntBASIC4.84□□□□□ -1.63
VBP1P61758 RN7SL570P-201ENST00000484405 292 ntBASIC4.84□□□□□ -1.63
VBP1P61758 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VBP1P61758 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.84□□□□□ -1.63
VBP1P61758 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.84□□□□□ -1.63
VBP1P61758 NPM1P6-201ENST00000521088 871 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.84□□□□□ -1.63
VBP1P61758 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.84□□□□□ -1.63
VBP1P61758 AC084851.2-201ENST00000530377 364 ntBASIC4.84□□□□□ -1.63
VBP1P61758 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VBP1P61758 VDAC2P2-201ENST00000544463 901 ntBASIC4.84□□□□□ -1.63
VBP1P61758 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.84□□□□□ -1.63
VBP1P61758 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.84□□□□□ -1.63
VBP1P61758 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.84□□□□□ -1.63
VBP1P61758 AP000769.2-201ENST00000602344 396 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AC244107.2-201ENST00000611773 76 ntBASIC4.84□□□□□ -1.63
VBP1P61758 AL080312.2-201ENST00000613001 630 ntBASIC4.84□□□□□ -1.63
VBP1P61758 MIR6503-201ENST00000622884 86 ntBASIC4.84□□□□□ -1.63
VBP1P61758 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.84□□□□□ -1.63
VBP1P61758 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.84□□□□□ -1.63
VBP1P61758 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
VBP1P61758 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VBP1P61758 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VBP1P61758 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.84□□□□□ -1.63
VBP1P61758 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VBP1P61758 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
VBP1P61758 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VBP1P61758 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 AC079298.1-201ENST00000625026 1619 ntBASIC4.83□□□□□ -1.64
VBP1P61758 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 OR9G4-201ENST00000302957 984 ntBASIC4.83□□□□□ -1.64
VBP1P61758 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VBP1P61758 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.83□□□□□ -1.64
VBP1P61758 AC019155.1-201ENST00000382242 574 ntBASIC4.83□□□□□ -1.64
VBP1P61758 EIF4A1P3-201ENST00000411521 244 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.83□□□□□ -1.64
VBP1P61758 AC007161.1-204ENST00000423039 460 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AC106901.1-201ENST00000425086 698 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AC046176.1-201ENST00000435260 1170 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AC023141.3-201ENST00000436698 278 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.83□□□□□ -1.64
VBP1P61758 BMS1P11-201ENST00000442351 885 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.83□□□□□ -1.64
VBP1P61758 BMS1P9-201ENST00000457640 885 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AL591473.1-201ENST00000464297 313 ntBASIC4.83□□□□□ -1.64
VBP1P61758 RN7SL809P-201ENST00000482040 297 ntBASIC4.83□□□□□ -1.64
VBP1P61758 RPL32P33-201ENST00000487023 394 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.83□□□□□ -1.64
VBP1P61758 RNA5SP228-201ENST00000516232 133 ntBASIC4.83□□□□□ -1.64
VBP1P61758 TDGP1-201ENST00000543961 1229 ntBASIC4.83□□□□□ -1.64
VBP1P61758 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.83□□□□□ -1.64
VBP1P61758 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms