Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC092474.3-201ENST00000603022 568 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 FAM27E4-201ENST00000605259 342 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC4P56524 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC4P56524 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HDAC4P56524 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC4P56524 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.01□□□□□ -1.45
HDAC4P56524 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC4P56524 AL353796.1-201ENST00000561542 3241 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HDAC4P56524 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 RNU6-883P-201ENST00000384597 107 ntBASIC6□□□□□ -1.45
HDAC4P56524 HSD17B7P1-201ENST00000412419 1017 ntBASIC6□□□□□ -1.45
HDAC4P56524 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 AL354766.1-201ENST00000423396 542 ntBASIC6□□□□□ -1.45
HDAC4P56524 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6□□□□□ -1.45
HDAC4P56524 PRUNEP1-201ENST00000425846 705 ntBASIC6□□□□□ -1.45
HDAC4P56524 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 OR7E116P-201ENST00000448529 957 ntBASIC6□□□□□ -1.45
HDAC4P56524 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6□□□□□ -1.45
HDAC4P56524 ACA64.1-201ENST00000459171 127 ntBASIC6□□□□□ -1.45
HDAC4P56524 RPL7P51-201ENST00000490532 749 ntBASIC6□□□□□ -1.45
HDAC4P56524 AC009120.1-201ENST00000493458 473 ntBASIC6□□□□□ -1.45
HDAC4P56524 RPL37AP8-201ENST00000494116 276 ntBASIC6□□□□□ -1.45
HDAC4P56524 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6□□□□□ -1.45
HDAC4P56524 RN7SL284P-201ENST00000498823 275 ntBASIC6□□□□□ -1.45
HDAC4P56524 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6□□□□□ -1.45
HDAC4P56524 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6□□□□□ -1.45
HDAC4P56524 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6□□□□□ -1.45
HDAC4P56524 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6□□□□□ -1.45
HDAC4P56524 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6□□□□□ -1.45
HDAC4P56524 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6□□□□□ -1.45
HDAC4P56524 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6□□□□□ -1.45
HDAC4P56524 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6□□□□□ -1.45
HDAC4P56524 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6□□□□□ -1.45
HDAC4P56524 AC092121.1-201ENST00000569452 202 ntBASIC6□□□□□ -1.45
HDAC4P56524 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 OR8G7P-201ENST00000616658 848 ntBASIC6□□□□□ -1.45
HDAC4P56524 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 OR8G3P-202ENST00000641572 1255 ntBASIC6□□□□□ -1.45
HDAC4P56524 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HDAC4P56524 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6□□□□□ -1.45
HDAC4P56524 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6□□□□□ -1.45
HDAC4P56524 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HDAC4P56524 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.99□□□□□ -1.45
HDAC4P56524 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.99□□□□□ -1.45
HDAC4P56524 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.99□□□□□ -1.45
HDAC4P56524 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.99□□□□□ -1.45
HDAC4P56524 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.99□□□□□ -1.45
HDAC4P56524 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
HDAC4P56524 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 AL159987.1-201ENST00000347911 293 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HDAC4P56524 RNU6-618P-201ENST00000363518 112 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 U3.10-201ENST00000364459 214 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HDAC4P56524 MIR130A-201ENST00000385274 89 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 OR7E101P-201ENST00000400428 513 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 SETP10-201ENST00000424368 814 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 VN1R21P-201ENST00000426703 765 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.99□□□□□ -1.45
HDAC4P56524 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.99□□□□□ -1.45
HDAC4P56524 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 RPSAP37-201ENST00000470913 821 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 AC073610.1-201ENST00000489971 396 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms