Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RPS3AP49-201ENST00000472161 790 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AC026826.1-201ENST00000493002 361 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AC009567.2-201ENST00000502989 349 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC6.16□□□□□ -1.42
GFRA1P56159 AC021220.1-201ENST00000507445 630 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 SNX18P23-201ENST00000510867 677 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 RNU6-1225P-201ENST00000516336 65 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.16□□□□□ -1.42
GFRA1P56159 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 AC074051.3-201ENST00000570238 358 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AC011260.1-201ENST00000578420 472 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 BPTFP1-201ENST00000579209 492 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 AP001267.4-201ENST00000602598 545 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AL590032.1-201ENST00000604920 252 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 AC128687.1-201ENST00000605304 619 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 AC241377.1-201ENST00000619797 406 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 SNORA16A-202ENST00000628458 135 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.16□□□□□ -1.42
GFRA1P56159 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
GFRA1P56159 AC015871.3-201ENST00000618835 2261 ntBASIC6.16□□□□□ -1.42
GFRA1P56159 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.16□□□□□ -1.42
GFRA1P56159 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
GFRA1P56159 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.15□□□□□ -1.42
GFRA1P56159 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.15□□□□□ -1.42
GFRA1P56159 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
GFRA1P56159 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.15□□□□□ -1.42
GFRA1P56159 RN7SKP142-201ENST00000411236 328 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 UBE2V1P10-201ENST00000414685 269 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 ELOCP17-201ENST00000414751 326 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 RAD23BP2-201ENST00000416003 1207 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.15□□□□□ -1.42
GFRA1P56159 AC114814.2-201ENST00000419195 485 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AC006509.1-201ENST00000420788 634 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 Z99497.1-201ENST00000421282 135 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AL589794.1-201ENST00000424971 390 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AL590128.1-201ENST00000433407 286 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 NMNAT1P2-201ENST00000435192 860 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 AC093155.1-201ENST00000440164 826 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AC016908.1-201ENST00000442571 1219 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 ZNF619P1-201ENST00000446539 752 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.15□□□□□ -1.42
GFRA1P56159 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 RPL23AP28-201ENST00000448062 470 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 DDX39BP2-208ENST00000453923 258 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 MTCO3P11-201ENST00000455103 774 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.15□□□□□ -1.42
GFRA1P56159 PGBD4P1-201ENST00000473644 407 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 RN7SL259P-201ENST00000478499 253 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 RPL7P16-201ENST00000479738 738 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 RN7SL187P-201ENST00000495587 303 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
GFRA1P56159 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.15□□□□□ -1.42
GFRA1P56159 ATP1B1P1-201ENST00000509767 915 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 RNU6-720P-201ENST00000516363 108 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 CDC42P3-201ENST00000518493 633 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 IGKV2D-10-201ENST00000520194 281 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
GFRA1P56159 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.15□□□□□ -1.42
GFRA1P56159 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.15□□□□□ -1.42
GFRA1P56159 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.15□□□□□ -1.42
GFRA1P56159 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.15□□□□□ -1.42
GFRA1P56159 OR5BK1P-201ENST00000550421 823 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.15□□□□□ -1.42
GFRA1P56159 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 ARGFXP2-201ENST00000579304 949 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.15□□□□□ -1.42
GFRA1P56159 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.15□□□□□ -1.42
GFRA1P56159 NTAN1P1-201ENST00000603150 646 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AC073648.5-201ENST00000603502 305 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms