Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SNURFL-201ENST00000309296 343 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
HMGCS2P54868 AL035419.1-201ENST00000397037 564 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 AC009784.1-201ENST00000426484 460 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 RPS3AP53-201ENST00000454716 778 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 AC058823.1-201ENST00000485315 474 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 AC007686.1-201ENST00000488511 463 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.2□□□□□ -1.42
HMGCS2P54868 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGCS2P54868 GTF2F2P1-201ENST00000511083 675 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGCS2P54868 AP002373.2-201ENST00000541631 1060 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGCS2P54868 CR383656.6-201ENST00000550518 394 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGCS2P54868 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGCS2P54868 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGCS2P54868 AC093799.2-201ENST00000610062 578 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 AC073869.8-201ENST00000641806 335 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCS2P54868 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
HMGCS2P54868 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HMGCS2P54868 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCS2P54868 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCS2P54868 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HMGCS2P54868 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCS2P54868 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
HMGCS2P54868 AL359955.1-201ENST00000455242 3275 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGCS2P54868 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGCS2P54868 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCS2P54868 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HMGCS2P54868 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HMGCS2P54868 PANDAR-201ENST00000629595 1506 ntBASIC6.2□□□□□ -1.42
HMGCS2P54868 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGCS2P54868 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGCS2P54868 AL360270.2-201ENST00000562952 5985 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGCS2P54868 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCS2P54868 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HMGCS2P54868 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCS2P54868 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCS2P54868 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGCS2P54868 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGCS2P54868 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGCS2P54868 DBIP1-201ENST00000401435 260 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 OR10T1P-201ENST00000424327 947 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGCS2P54868 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCS2P54868 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCS2P54868 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCS2P54868 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCS2P54868 RPL7P40-201ENST00000481703 745 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 RN7SL423P-201ENST00000486202 304 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCS2P54868 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 AP001804.1-201ENST00000526868 919 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCS2P54868 AC005000.1-201ENST00000536192 288 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HMGCS2P54868 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCS2P54868 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCS2P54868 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.19□□□□□ -1.42
HMGCS2P54868 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
HMGCS2P54868 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGCS2P54868 AC009597.2-201ENST00000604659 592 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGCS2P54868 AC015660.5-201ENST00000623238 564 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGCS2P54868 AP000550.3-201ENST00000637734 379 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
HMGCS2P54868 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCS2P54868 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGCS2P54868 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCS2P54868 CASC19-243ENST00000641588 1546 ntBASIC6.19□□□□□ -1.42
HMGCS2P54868 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCS2P54868 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HMGCS2P54868 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HMGCS2P54868 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGCS2P54868 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HMGCS2P54868 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGCS2P54868 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGCS2P54868 RNU1-146P-201ENST00000364015 165 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 RNU1-59P-201ENST00000364829 162 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 GNG5P2-201ENST00000372054 207 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 MIR600-201ENST00000385007 98 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 RPL23AP18-201ENST00000416139 468 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGCS2P54868 AL360081.1-201ENST00000428299 555 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGCS2P54868 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGCS2P54868 CBX1P2-201ENST00000453841 458 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms