Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 ICE2P1-201ENST00000512800 1849 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RNF144AP50876 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 OR5P1P-201ENST00000299512 925 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 RNU6-533P-201ENST00000384144 107 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 RPL5P35-201ENST00000398869 816 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 PEX12P1-201ENST00000400284 1048 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 VIM2P-201ENST00000402383 1294 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 AC011753.4-201ENST00000417974 311 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 GAPDHP49-201ENST00000421421 961 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF144AP50876 RPL23AP34-201ENST00000423483 410 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF144AP50876 RIMKLBP2-201ENST00000424737 654 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 RPL19P21-201ENST00000424919 591 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 HSPE1P16-201ENST00000426640 348 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF144AP50876 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 NPM1P39-201ENST00000449818 867 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF144AP50876 AC092570.2-201ENST00000452117 1143 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 RPL7P48-201ENST00000461513 746 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 RN7SL791P-201ENST00000467868 295 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 RN7SL335P-201ENST00000482790 304 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF144AP50876 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 NPY6R-201ENST00000503807 1112 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 CDH12P2-201ENST00000504393 298 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC139783.2-201ENST00000504847 1145 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 NMNAT1P4-201ENST00000505598 840 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF144AP50876 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 RPL21P5-201ENST00000554662 472 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 AL845331.3-202ENST00000562856 261 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC093249.1-201ENST00000567049 203 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF144AP50876 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF144AP50876 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF144AP50876 AL391646.1-201ENST00000603860 190 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC112187.2-201ENST00000604345 283 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 MIR6872-201ENST00000612981 62 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF144AP50876 AC243756.2-201ENST00000618406 463 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC129778.1-202ENST00000623812 261 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC021106.3-201ENST00000623925 531 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF144AP50876 AL591379.1-207ENST00000635982 261 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF144AP50876 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF144AP50876 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF144AP50876 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RNF144AP50876 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
RNF144AP50876 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 AC006511.3-201ENST00000624929 1783 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF144AP50876 OR2A3P-202ENST00000641249 1776 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 CDR1-202ENST00000625883 1485 ntBASIC7.17□□□□□ -1.26
RNF144AP50876 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
RNF144AP50876 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.17□□□□□ -1.26
RNF144AP50876 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC7.17□□□□□ -1.26
RNF144AP50876 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
RNF144AP50876 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms