Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
SOX2P48431 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.27□□□□□ -1.57
SOX2P48431 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 EIF3EP1-201ENST00000433978 1316 ntBASIC5.27□□□□□ -1.57
SOX2P48431 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX2P48431 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 OR10R3P-201ENST00000361688 942 ntBASIC5.27□□□□□ -1.57
SOX2P48431 RNA5SP485-201ENST00000365053 119 ntBASIC5.27□□□□□ -1.57
SOX2P48431 RNU11-201ENST00000387069 134 ntBASIC5.27□□□□□ -1.57
SOX2P48431 RNA5SP105-201ENST00000391123 113 ntBASIC5.27□□□□□ -1.57
SOX2P48431 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 AL157702.1-201ENST00000398764 426 ntBASIC5.27□□□□□ -1.57
SOX2P48431 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 AC006065.1-201ENST00000422539 802 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AL034379.1-201ENST00000423216 253 ntBASIC5.27□□□□□ -1.57
SOX2P48431 GPN3P1-201ENST00000423883 535 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AC092648.1-201ENST00000425870 423 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 AC013403.1-201ENST00000436954 263 ntBASIC5.27□□□□□ -1.57
SOX2P48431 HMGN1P32-201ENST00000441744 256 ntBASIC5.27□□□□□ -1.57
SOX2P48431 VN1R25P-201ENST00000443385 738 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AC023512.1-201ENST00000444513 499 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AL161722.1-201ENST00000446972 1032 ntBASIC5.27□□□□□ -1.57
SOX2P48431 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 Z95152.1-201ENST00000453556 656 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AC092155.2-201ENST00000454675 477 ntBASIC5.27□□□□□ -1.57
SOX2P48431 CST12P-201ENST00000457644 362 ntBASIC5.27□□□□□ -1.57
SOX2P48431 RN7SL39P-201ENST00000462264 297 ntBASIC5.27□□□□□ -1.57
SOX2P48431 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.27□□□□□ -1.57
SOX2P48431 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX2P48431 AC025470.1-201ENST00000510053 2032 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AC119751.5-201ENST00000514077 770 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AC011416.1-201ENST00000514947 1732 ntBASIC5.27□□□□□ -1.57
SOX2P48431 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX2P48431 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX2P48431 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.27□□□□□ -1.57
SOX2P48431 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX2P48431 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 AL049830.4-201ENST00000555149 351 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 AC037479.1-201ENST00000558361 625 ntBASIC5.27□□□□□ -1.57
SOX2P48431 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 ZNF971P-201ENST00000562068 1249 ntBASIC5.27□□□□□ -1.57
SOX2P48431 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 MIR4732-201ENST00000581873 76 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 AC004223.2-201ENST00000590309 544 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX2P48431 AL360012.1-201ENST00000602813 131 ntBASIC5.27□□□□□ -1.57
SOX2P48431 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 AC002487.1-201ENST00000604565 994 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AL390877.1-201ENST00000605704 214 ntBASIC5.27□□□□□ -1.57
SOX2P48431 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 AC006386.1-201ENST00000619436 415 ntBASIC5.27□□□□□ -1.57
SOX2P48431 MIR6503-201ENST00000622884 86 ntBASIC5.27□□□□□ -1.57
SOX2P48431 SNX18P12-201ENST00000624821 759 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AC068213.1-201ENST00000625124 226 ntBASIC5.27□□□□□ -1.57
SOX2P48431 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 AP001153.1-201ENST00000641024 338 ntBASIC5.27□□□□□ -1.57
SOX2P48431 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SOX2P48431 MFSD8-220ENST00000641243 1422 ntBASIC5.27□□□□□ -1.57
SOX2P48431 AC005005.4-201ENST00000623789 16698 ntBASIC5.27□□□□□ -1.57
SOX2P48431 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.27□□□□□ -1.57
SOX2P48431 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX2P48431 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
SOX2P48431 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX2P48431 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms