Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 PNKDP1-201ENST00000435914 430 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AL513321.1-201ENST00000441175 761 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AC023271.1-201ENST00000445936 1090 ntBASIC4.84□□□□□ -1.63
CDX1P47902 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 RANP2-201ENST00000456833 229 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AC092691.2-201ENST00000461787 803 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AP002884.1-201ENST00000479691 655 ntBASIC4.84□□□□□ -1.63
CDX1P47902 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 AC025768.1-201ENST00000510057 267 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.84□□□□□ -1.63
CDX1P47902 HIGD1AP18-201ENST00000520730 278 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.84□□□□□ -1.63
CDX1P47902 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CDX1P47902 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.84□□□□□ -1.63
CDX1P47902 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.84□□□□□ -1.63
CDX1P47902 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 AC023158.1-201ENST00000561632 1025 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AC018552.1-201ENST00000562099 811 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AC021483.2-201ENST00000567415 758 ntBASIC4.84□□□□□ -1.63
CDX1P47902 MRPS21P8-201ENST00000569196 235 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.84□□□□□ -1.63
CDX1P47902 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.84□□□□□ -1.63
CDX1P47902 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.84□□□□□ -1.63
CDX1P47902 AC006924.1-201ENST00000610750 559 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AC025016.1-201ENST00000616746 682 ntBASIC4.84□□□□□ -1.63
CDX1P47902 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.84□□□□□ -1.63
CDX1P47902 AC096708.4-201ENST00000620563 552 ntBASIC4.84□□□□□ -1.63
CDX1P47902 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.84□□□□□ -1.63
CDX1P47902 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CDX1P47902 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
CDX1P47902 AP005432.1-201ENST00000580891 3485 ntBASIC4.84□□□□□ -1.63
CDX1P47902 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 AL031595.2-201ENST00000624215 19071 ntBASIC4.84□□□□□ -1.63
CDX1P47902 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDX1P47902 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDX1P47902 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CDX1P47902 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDX1P47902 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.84□□□□□ -1.64
CDX1P47902 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.84□□□□□ -1.64
CDX1P47902 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDX1P47902 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
CDX1P47902 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDX1P47902 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CDX1P47902 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.83□□□□□ -1.64
CDX1P47902 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.83□□□□□ -1.64
CDX1P47902 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDX1P47902 QRSL1P1-201ENST00000400977 1540 ntBASIC4.83□□□□□ -1.64
CDX1P47902 AC068446.1-201ENST00000556425 1549 ntBASIC4.83□□□□□ -1.64
CDX1P47902 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.83□□□□□ -1.64
CDX1P47902 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDX1P47902 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.83□□□□□ -1.64
CDX1P47902 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDX1P47902 COX6B1P3-201ENST00000312310 260 ntBASIC4.83□□□□□ -1.64
CDX1P47902 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDX1P47902 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDX1P47902 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDX1P47902 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CDX1P47902 SETP15-201ENST00000412724 337 ntBASIC4.83□□□□□ -1.64
CDX1P47902 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.83□□□□□ -1.64
CDX1P47902 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDX1P47902 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDX1P47902 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.83□□□□□ -1.64
CDX1P47902 AL390879.2-203ENST00000426943 1121 ntBASIC4.83□□□□□ -1.64
CDX1P47902 AL590762.3-201ENST00000436372 640 ntBASIC4.83□□□□□ -1.64
CDX1P47902 CYCSP11-201ENST00000436426 315 ntBASIC4.83□□□□□ -1.64
CDX1P47902 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.83□□□□□ -1.64
CDX1P47902 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.83□□□□□ -1.64
CDX1P47902 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.83□□□□□ -1.64
CDX1P47902 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.83□□□□□ -1.64
CDX1P47902 AL353718.1-201ENST00000451028 517 ntBASIC4.83□□□□□ -1.64
CDX1P47902 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.83□□□□□ -1.64
CDX1P47902 PSMC1P13-201ENST00000458195 985 ntBASIC4.83□□□□□ -1.64
CDX1P47902 AC068228.1-201ENST00000461723 211 ntBASIC4.83□□□□□ -1.64
CDX1P47902 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.83□□□□□ -1.64
CDX1P47902 RBBP4P1-201ENST00000502424 1276 ntBASIC4.83□□□□□ -1.64
CDX1P47902 OR7E99P-201ENST00000505750 922 ntBASIC4.83□□□□□ -1.64
CDX1P47902 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC4.83□□□□□ -1.64
CDX1P47902 GLUD1P3-202ENST00000508551 200 ntBASIC4.83□□□□□ -1.64
CDX1P47902 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.83□□□□□ -1.64
CDX1P47902 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.83□□□□□ -1.64
CDX1P47902 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.83□□□□□ -1.64
CDX1P47902 AC108120.2-201ENST00000512973 294 ntBASIC4.83□□□□□ -1.64
CDX1P47902 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.83□□□□□ -1.64
CDX1P47902 CYP4F27P-201ENST00000514557 494 ntBASIC4.83□□□□□ -1.64
CDX1P47902 RNU6-1308P-201ENST00000516817 103 ntBASIC4.83□□□□□ -1.64
CDX1P47902 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.83□□□□□ -1.64
CDX1P47902 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.83□□□□□ -1.64
CDX1P47902 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.83□□□□□ -1.64
CDX1P47902 OR8A2P-201ENST00000528631 952 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms