Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL022067.1-201ENST00000602426 454 ntBASIC6.16□□□□□ -1.42
SLC6A4P31645 AC100767.2-201ENST00000604840 693 ntBASIC6.16□□□□□ -1.42
SLC6A4P31645 AC004890.3-201ENST00000605566 1095 ntBASIC6.16□□□□□ -1.42
SLC6A4P31645 AL592494.3-201ENST00000609485 464 ntBASIC6.16□□□□□ -1.42
SLC6A4P31645 AC019226.2-201ENST00000625973 424 ntBASIC6.16□□□□□ -1.42
SLC6A4P31645 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.16□□□□□ -1.42
SLC6A4P31645 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.16□□□□□ -1.42
SLC6A4P31645 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.16□□□□□ -1.42
SLC6A4P31645 AC027088.4-201ENST00000611559 1947 ntBASIC6.16□□□□□ -1.42
SLC6A4P31645 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SLC6A4P31645 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.16□□□□□ -1.42
SLC6A4P31645 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.16□□□□□ -1.42
SLC6A4P31645 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SLC6A4P31645 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SLC6A4P31645 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SLC6A4P31645 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SLC6A4P31645 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SLC6A4P31645 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SLC6A4P31645 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SLC6A4P31645 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
SLC6A4P31645 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SLC6A4P31645 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
SLC6A4P31645 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.15□□□□□ -1.42
SLC6A4P31645 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SLC6A4P31645 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SLC6A4P31645 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.15□□□□□ -1.42
SLC6A4P31645 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SLC6A4P31645 RN7SKP78-201ENST00000364711 318 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SLC6A4P31645 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SLC6A4P31645 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 MTCO2P31-201ENST00000402702 684 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 SNORA79B-201ENST00000410557 148 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AL592310.1-201ENST00000414330 671 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.15□□□□□ -1.42
SLC6A4P31645 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SLC6A4P31645 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 BX119321.1-201ENST00000428912 797 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AL445928.1-201ENST00000435545 222 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 ARF4P4-201ENST00000439608 520 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 NANOGP9-201ENST00000439890 892 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.15□□□□□ -1.42
SLC6A4P31645 AC073109.1-201ENST00000445066 978 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.15□□□□□ -1.42
SLC6A4P31645 LRRC37A14P-201ENST00000452297 462 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 RPL7L1P3-201ENST00000455249 689 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.15□□□□□ -1.42
SLC6A4P31645 UBFD1P1-201ENST00000473259 814 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.15□□□□□ -1.42
SLC6A4P31645 CBX1P5-201ENST00000475330 559 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AC124945.1-201ENST00000485133 188 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 HMGB1P38-201ENST00000490557 577 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SLC6A4P31645 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SLC6A4P31645 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.15□□□□□ -1.42
SLC6A4P31645 ASNSP4-201ENST00000511103 447 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 CYP4F27P-201ENST00000514557 494 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.15□□□□□ -1.42
SLC6A4P31645 PCNAP4-201ENST00000532690 730 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 MRPS36P5-201ENST00000551909 298 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 DPPA3P2-202ENST00000557188 1219 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.15□□□□□ -1.42
SLC6A4P31645 MIR132-201ENST00000591554 101 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 Z99289.3-201ENST00000605586 594 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AC005021.1-201ENST00000608730 355 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AP005431.1-201ENST00000618479 319 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 RMST_5.1-201ENST00000618704 126 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.15□□□□□ -1.42
SLC6A4P31645 AC026124.2-201ENST00000621847 656 ntBASIC6.15□□□□□ -1.42
SLC6A4P31645 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.15□□□□□ -1.42
SLC6A4P31645 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.15□□□□□ -1.42
SLC6A4P31645 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.15□□□□□ -1.42
SLC6A4P31645 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.15□□□□□ -1.42
SLC6A4P31645 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.15□□□□□ -1.43
SLC6A4P31645 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SLC6A4P31645 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.14□□□□□ -1.43
SLC6A4P31645 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SLC6A4P31645 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SLC6A4P31645 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.14□□□□□ -1.43
SLC6A4P31645 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SLC6A4P31645 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SLC6A4P31645 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SLC6A4P31645 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.14□□□□□ -1.43
SLC6A4P31645 AC009135.2-201ENST00000624136 1768 ntBASIC6.14□□□□□ -1.43
SLC6A4P31645 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.14□□□□□ -1.43
SLC6A4P31645 ZNF29P-201ENST00000225587 168 ntBASIC6.14□□□□□ -1.43
SLC6A4P31645 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SLC6A4P31645 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SLC6A4P31645 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SLC6A4P31645 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SLC6A4P31645 RNU4-40P-201ENST00000364351 143 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms