Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.99□□□□□ -1.13
RXRBP28702 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.99□□□□□ -1.13
RXRBP28702 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.99□□□□□ -1.13
RXRBP28702 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC7.99□□□□□ -1.13
RXRBP28702 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.99□□□□□ -1.13
RXRBP28702 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.99□□□□□ -1.13
RXRBP28702 AC067959.1-201ENST00000604334 379 ntBASIC7.99□□□□□ -1.13
RXRBP28702 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 RNU6-1192P-201ENST00000612197 107 ntBASIC7.99□□□□□ -1.13
RXRBP28702 RNU6-489P-201ENST00000618289 107 ntBASIC7.99□□□□□ -1.13
RXRBP28702 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 AC084035.1-201ENST00000634543 607 ntBASIC7.99□□□□□ -1.13
RXRBP28702 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.99□□□□□ -1.13
RXRBP28702 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.99□□□□□ -1.13
RXRBP28702 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 AP005139.1-201ENST00000580702 1647 ntBASIC7.99□□□□□ -1.13
RXRBP28702 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RXRBP28702 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
RXRBP28702 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
RXRBP28702 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.98□□□□□ -1.13
RXRBP28702 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.98□□□□□ -1.13
RXRBP28702 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 AL139384.2-201ENST00000613809 3590 ntBASIC7.98□□□□□ -1.13
RXRBP28702 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
RXRBP28702 SNORD51.1-201ENST00000365405 77 ntBASIC7.98□□□□□ -1.13
RXRBP28702 BMS1P3-201ENST00000372011 932 ntBASIC7.98□□□□□ -1.13
RXRBP28702 RNU6-298P-201ENST00000390888 96 ntBASIC7.98□□□□□ -1.13
RXRBP28702 RAP1BP3-201ENST00000407180 549 ntBASIC7.98□□□□□ -1.13
RXRBP28702 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.98□□□□□ -1.13
RXRBP28702 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC7.98□□□□□ -1.13
RXRBP28702 RPL5P2-201ENST00000429598 854 ntBASIC7.98□□□□□ -1.13
RXRBP28702 OR52B5P-201ENST00000435337 951 ntBASIC7.98□□□□□ -1.13
RXRBP28702 AC092447.2-201ENST00000435487 669 ntBASIC7.98□□□□□ -1.13
RXRBP28702 OR10R1P-201ENST00000441524 1141 ntBASIC7.98□□□□□ -1.13
RXRBP28702 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.98□□□□□ -1.13
RXRBP28702 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.98□□□□□ -1.13
RXRBP28702 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.98□□□□□ -1.13
RXRBP28702 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC7.98□□□□□ -1.13
RXRBP28702 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.98□□□□□ -1.13
RXRBP28702 AC091860.1-201ENST00000505723 432 ntBASIC7.98□□□□□ -1.13
RXRBP28702 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.98□□□□□ -1.13
RXRBP28702 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7.98□□□□□ -1.13
RXRBP28702 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC7.98□□□□□ -1.13
RXRBP28702 AC091163.3-201ENST00000518269 1144 ntBASIC7.98□□□□□ -1.13
RXRBP28702 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 ZDHHC20P3-201ENST00000531576 336 ntBASIC7.98□□□□□ -1.13
RXRBP28702 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
RXRBP28702 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 MTCYBP23-201ENST00000558717 1102 ntBASIC7.98□□□□□ -1.13
RXRBP28702 DPPA2P4-201ENST00000563717 878 ntBASIC7.98□□□□□ -1.13
RXRBP28702 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.98□□□□□ -1.13
RXRBP28702 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.98□□□□□ -1.13
RXRBP28702 AC025588.2-201ENST00000604851 466 ntBASIC7.98□□□□□ -1.13
RXRBP28702 FAM25E-202ENST00000608562 189 ntBASIC7.98□□□□□ -1.13
RXRBP28702 AL512427.1-201ENST00000618593 349 ntBASIC7.98□□□□□ -1.13
RXRBP28702 AC091953.3-201ENST00000623220 236 ntBASIC7.98□□□□□ -1.13
RXRBP28702 AC120057.5-201ENST00000623840 154 ntBASIC7.98□□□□□ -1.13
RXRBP28702 OR52B5P-202ENST00000641118 1110 ntBASIC7.98□□□□□ -1.13
RXRBP28702 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 AL391262.1-201ENST00000556558 1992 ntBASIC7.98□□□□□ -1.13
RXRBP28702 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
RXRBP28702 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
RXRBP28702 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.98□□□□□ -1.13
RXRBP28702 AL662795.2-201ENST00000624252 3706 ntBASIC7.98□□□□□ -1.13
RXRBP28702 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RXRBP28702 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.98□□□□□ -1.13
RXRBP28702 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.97□□□□□ -1.13
RXRBP28702 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.97□□□□□ -1.13
RXRBP28702 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
RXRBP28702 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RXRBP28702 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.97□□□□□ -1.13
RXRBP28702 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
RXRBP28702 RNA5SP319-201ENST00000362768 119 ntBASIC7.97□□□□□ -1.13
RXRBP28702 AC096537.2-201ENST00000413707 714 ntBASIC7.97□□□□□ -1.13
RXRBP28702 RPL30P16-201ENST00000419341 429 ntBASIC7.97□□□□□ -1.13
RXRBP28702 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC7.97□□□□□ -1.13
RXRBP28702 AL022331.1-201ENST00000429025 477 ntBASIC7.97□□□□□ -1.13
RXRBP28702 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.97□□□□□ -1.13
RXRBP28702 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC7.97□□□□□ -1.13
RXRBP28702 AC016027.4-201ENST00000450866 277 ntBASIC7.97□□□□□ -1.13
RXRBP28702 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC7.97□□□□□ -1.13
RXRBP28702 RPS17P15-201ENST00000475609 349 ntBASIC7.97□□□□□ -1.13
RXRBP28702 SSR3-208ENST00000496050 579 ntTSL 4 BASIC7.97□□□□□ -1.13
RXRBP28702 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms