Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 TUBBP10-201ENST00000427668 1301 ntBASIC7.68□□□□□ -1.18
VARSP26640 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
VARSP26640 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 SMG1P1-202ENST00000309865 4223 ntBASIC7.68□□□□□ -1.18
VARSP26640 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.68□□□□□ -1.18
VARSP26640 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
VARSP26640 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 FARSBP1-201ENST00000435808 1778 ntBASIC7.67□□□□□ -1.18
VARSP26640 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
VARSP26640 AC073342.2-201ENST00000595842 1800 ntBASIC7.67□□□□□ -1.18
VARSP26640 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 MIR559-201ENST00000385188 96 ntBASIC7.67□□□□□ -1.18
VARSP26640 RPS24P12-201ENST00000402084 394 ntBASIC7.67□□□□□ -1.18
VARSP26640 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.67□□□□□ -1.18
VARSP26640 AC211486.3-201ENST00000412694 621 ntBASIC7.67□□□□□ -1.18
VARSP26640 RPL23AP34-201ENST00000423483 410 ntBASIC7.67□□□□□ -1.18
VARSP26640 RPL19P21-201ENST00000424919 591 ntBASIC7.67□□□□□ -1.18
VARSP26640 AC127526.2-201ENST00000426436 775 ntBASIC7.67□□□□□ -1.18
VARSP26640 PRPS1P2-201ENST00000430496 937 ntBASIC7.67□□□□□ -1.18
VARSP26640 GTF2IP20-201ENST00000431663 360 ntBASIC7.67□□□□□ -1.18
VARSP26640 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 AC016734.1-201ENST00000436998 654 ntBASIC7.67□□□□□ -1.18
VARSP26640 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.67□□□□□ -1.18
VARSP26640 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.67□□□□□ -1.18
VARSP26640 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.67□□□□□ -1.18
VARSP26640 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.67□□□□□ -1.18
VARSP26640 RPL7P19-201ENST00000469948 618 ntBASIC7.67□□□□□ -1.18
VARSP26640 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.67□□□□□ -1.18
VARSP26640 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.67□□□□□ -1.18
VARSP26640 AC008868.1-201ENST00000509786 737 ntBASIC7.67□□□□□ -1.18
VARSP26640 RNU6-1334P-201ENST00000516032 105 ntBASIC7.67□□□□□ -1.18
VARSP26640 RNU6-1046P-201ENST00000516538 107 ntBASIC7.67□□□□□ -1.18
VARSP26640 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.67□□□□□ -1.18
VARSP26640 OR6M3P-201ENST00000531567 700 ntBASIC7.67□□□□□ -1.18
VARSP26640 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 AC093249.1-201ENST00000567049 203 ntBASIC7.67□□□□□ -1.18
VARSP26640 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 RN7SL42P-201ENST00000579786 294 ntBASIC7.67□□□□□ -1.18
VARSP26640 MIR4682-201ENST00000580643 80 ntBASIC7.67□□□□□ -1.18
VARSP26640 PRELID3BP8-201ENST00000604148 295 ntBASIC7.67□□□□□ -1.18
VARSP26640 AL355598.1-201ENST00000604169 202 ntBASIC7.67□□□□□ -1.18
VARSP26640 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.67□□□□□ -1.18
VARSP26640 RMST_3.1-201ENST00000611651 109 ntBASIC7.67□□□□□ -1.18
VARSP26640 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 AC074029.3-201ENST00000618623 312 ntBASIC7.67□□□□□ -1.18
VARSP26640 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.67□□□□□ -1.18
VARSP26640 AC092650.2-201ENST00000619984 902 ntBASIC7.67□□□□□ -1.18
VARSP26640 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.67□□□□□ -1.18
VARSP26640 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 MIR3120-201ENST00000636555 81 ntBASIC7.67□□□□□ -1.18
VARSP26640 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
VARSP26640 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.67□□□□□ -1.18
VARSP26640 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
VARSP26640 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.67□□□□□ -1.18
VARSP26640 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
VARSP26640 AC114786.2-201ENST00000510090 1426 ntBASIC7.67□□□□□ -1.18
VARSP26640 AC010928.1-201ENST00000592477 1447 ntBASIC7.67□□□□□ -1.18
VARSP26640 AL031651.1-201ENST00000615357 1438 ntBASIC7.67□□□□□ -1.18
VARSP26640 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
VARSP26640 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
VARSP26640 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VARSP26640 CDY11P-201ENST00000447168 1651 ntBASIC7.67□□□□□ -1.18
VARSP26640 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARSP26640 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.66□□□□□ -1.18
VARSP26640 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VARSP26640 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC7.66□□□□□ -1.18
VARSP26640 AL157831.2-201ENST00000564681 3095 ntBASIC7.66□□□□□ -1.18
VARSP26640 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.66□□□□□ -1.18
VARSP26640 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.66□□□□□ -1.18
VARSP26640 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.66□□□□□ -1.18
VARSP26640 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARSP26640 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms