Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC009506.2-201ENST00000420635 840 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 OR10T1P-201ENST00000424327 947 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 AC099670.2-201ENST00000435130 321 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 CNOT7P2-201ENST00000441051 832 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.59□□□□□ -1.67
COL8A2P25067 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.59□□□□□ -1.67
COL8A2P25067 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.59□□□□□ -1.67
COL8A2P25067 AC079841.1-201ENST00000481228 950 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 AC012123.2-201ENST00000485809 248 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 RN7SL447P-201ENST00000494711 245 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 HMGB1P44-201ENST00000508597 572 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.59□□□□□ -1.67
COL8A2P25067 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.59□□□□□ -1.67
COL8A2P25067 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.59□□□□□ -1.67
COL8A2P25067 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.59□□□□□ -1.67
COL8A2P25067 AC106730.2-201ENST00000566641 540 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
COL8A2P25067 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
COL8A2P25067 LSM1P2-201ENST00000604911 322 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL8A2P25067 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 AC109583.2-201ENST00000617367 129 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 WBP1LP8-201ENST00000617401 327 ntBASIC4.59□□□□□ -1.67
COL8A2P25067 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL8A2P25067 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.59□□□□□ -1.67
COL8A2P25067 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.59□□□□□ -1.67
COL8A2P25067 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL8A2P25067 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.59□□□□□ -1.67
COL8A2P25067 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL8A2P25067 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL8A2P25067 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL8A2P25067 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL8A2P25067 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL8A2P25067 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL8A2P25067 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.58□□□□□ -1.68
COL8A2P25067 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL8A2P25067 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL8A2P25067 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL8A2P25067 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.58□□□□□ -1.68
COL8A2P25067 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
COL8A2P25067 OR4K12P-201ENST00000406538 961 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 RN7SKP17-201ENST00000411242 351 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 DPPA2P2-201ENST00000418220 897 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 PRUNEP1-201ENST00000425846 705 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 RPL7P56-201ENST00000429441 717 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.58□□□□□ -1.68
COL8A2P25067 MTND2P40-201ENST00000436718 841 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 AC245047.2-201ENST00000441060 530 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 EEF1B2P5-201ENST00000444820 548 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.58□□□□□ -1.68
COL8A2P25067 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.58□□□□□ -1.68
COL8A2P25067 AURKAPS1-201ENST00000451805 1212 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 RN7SL727P-201ENST00000482164 296 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 AC093763.2-201ENST00000505334 1223 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.58□□□□□ -1.68
COL8A2P25067 AC097486.1-201ENST00000515331 210 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 RNU6-941P-201ENST00000516346 108 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.58□□□□□ -1.68
COL8A2P25067 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.58□□□□□ -1.68
COL8A2P25067 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.58□□□□□ -1.68
COL8A2P25067 HMGB1P40-201ENST00000525121 540 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 AP004607.2-201ENST00000533949 322 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.58□□□□□ -1.68
COL8A2P25067 HAUS8P1-201ENST00000549005 542 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
COL8A2P25067 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.58□□□□□ -1.68
COL8A2P25067 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.58□□□□□ -1.68
COL8A2P25067 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.58□□□□□ -1.68
COL8A2P25067 AC092944.2-201ENST00000605443 889 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 AL353729.2-201ENST00000605859 1249 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 AP002505.2-201ENST00000623585 696 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 AC069542.2-201ENST00000624816 216 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.58□□□□□ -1.68
COL8A2P25067 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL8A2P25067 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL8A2P25067 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL8A2P25067 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.58□□□□□ -1.68
COL8A2P25067 AL353796.1-201ENST00000561542 3241 ntBASIC4.58□□□□□ -1.68
COL8A2P25067 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL8A2P25067 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.58□□□□□ -1.68
COL8A2P25067 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.58□□□□□ -1.68
COL8A2P25067 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL8A2P25067 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
COL8A2P25067 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
COL8A2P25067 AP005435.3-201ENST00000531260 3198 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 AP002512.4-202ENST00000641599 4530 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.57□□□□□ -1.68
COL8A2P25067 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.57□□□□□ -1.68
COL8A2P25067 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
COL8A2P25067 AL354868.1-201ENST00000417077 482 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL8A2P25067 RIMKLBP2-201ENST00000424737 654 ntBASIC4.57□□□□□ -1.68
COL8A2P25067 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms