Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH3P22223 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH3P22223 AC011445.2-201ENST00000599274 173 ntBASIC5.6□□□□□ -1.51
CDH3P22223 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDH3P22223 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH3P22223 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH3P22223 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH3P22223 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH3P22223 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH3P22223 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH3P22223 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH3P22223 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH3P22223 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH3P22223 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH3P22223 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH3P22223 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH3P22223 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CDH3P22223 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.59□□□□□ -1.51
CDH3P22223 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH3P22223 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH3P22223 HMGB1P20-201ENST00000402555 677 ntBASIC5.59□□□□□ -1.51
CDH3P22223 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH3P22223 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH3P22223 AC019205.1-201ENST00000421830 730 ntBASIC5.59□□□□□ -1.51
CDH3P22223 AC127526.2-201ENST00000426436 775 ntBASIC5.59□□□□□ -1.51
CDH3P22223 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CDH3P22223 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH3P22223 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH3P22223 RN7SL72P-201ENST00000460697 269 ntBASIC5.59□□□□□ -1.51
CDH3P22223 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
CDH3P22223 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.59□□□□□ -1.51
CDH3P22223 OR7E157P-201ENST00000494376 911 ntBASIC5.59□□□□□ -1.51
CDH3P22223 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH3P22223 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH3P22223 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH3P22223 SCARNA6.1-201ENST00000516989 238 ntBASIC5.59□□□□□ -1.51
CDH3P22223 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.59□□□□□ -1.51
CDH3P22223 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH3P22223 AL049779.3-201ENST00000557141 606 ntBASIC5.59□□□□□ -1.51
CDH3P22223 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH3P22223 AP002884.5-201ENST00000595053 1132 ntBASIC5.59□□□□□ -1.51
CDH3P22223 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH3P22223 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH3P22223 RN7SL787P-201ENST00000613000 284 ntBASIC5.59□□□□□ -1.51
CDH3P22223 RN7SL544P-201ENST00000617232 284 ntBASIC5.59□□□□□ -1.51
CDH3P22223 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH3P22223 RN7SL763P-201ENST00000620922 284 ntBASIC5.59□□□□□ -1.51
CDH3P22223 AC006840.1-201ENST00000623069 542 ntBASIC5.59□□□□□ -1.51
CDH3P22223 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH3P22223 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH3P22223 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.52
CDH3P22223 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.59□□□□□ -1.52
CDH3P22223 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CDH3P22223 AL138820.1-201ENST00000617901 5305 ntBASIC5.59□□□□□ -1.52
CDH3P22223 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH3P22223 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CDH3P22223 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH3P22223 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CDH3P22223 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDH3P22223 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDH3P22223 AC087752.1-201ENST00000391360 558 ntBASIC5.58□□□□□ -1.52
CDH3P22223 EI24P3-201ENST00000399046 1062 ntBASIC5.58□□□□□ -1.52
CDH3P22223 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH3P22223 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH3P22223 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH3P22223 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 AC006455.6-201ENST00000426192 893 ntBASIC5.58□□□□□ -1.52
CDH3P22223 AL022331.1-201ENST00000429025 477 ntBASIC5.58□□□□□ -1.52
CDH3P22223 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 LRRC37A14P-201ENST00000452297 462 ntBASIC5.58□□□□□ -1.52
CDH3P22223 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH3P22223 SEPT7P6-201ENST00000469999 1143 ntBASIC5.58□□□□□ -1.52
CDH3P22223 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 AC079080.1-201ENST00000479841 822 ntBASIC5.58□□□□□ -1.52
CDH3P22223 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH3P22223 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 AC106872.4-201ENST00000510050 523 ntBASIC5.58□□□□□ -1.52
CDH3P22223 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH3P22223 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH3P22223 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH3P22223 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH3P22223 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH3P22223 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms