Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CSB-PGBD3P0DP91 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 LPAL2-203ENST00000454031 2498 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 NXF4-202ENST00000416098 1465 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AL133268.1-201ENST00000405676 1401 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC005839.1-201ENST00000624148 3213 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AL359976.1-201ENST00000418655 3528 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 RN7SKP81-201ENST00000365603 331 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 SNORA51.9-201ENST00000384295 124 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 Y_RNA.472-201ENST00000384322 102 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 RN7SKP229-201ENST00000410465 302 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 MRPL35P2-201ENST00000448009 511 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 PPIAP27-201ENST00000453800 265 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC023194.2-201ENST00000465398 406 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC098847.1-201ENST00000473094 348 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC022415.1-202ENST00000486612 523 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC026826.1-201ENST00000493002 361 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC025458.1-201ENST00000506046 166 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC087360.1-201ENST00000518788 616 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 IGKV3D-25-201ENST00000519599 235 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC036111.2-201ENST00000533247 901 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 GARSP1-201ENST00000570895 719 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 MTCO3P24-201ENST00000572729 782 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AL356986.1-201ENST00000604085 341 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC012409.3-201ENST00000611343 981 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AL080312.2-201ENST00000613001 630 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 FAM27E2-201ENST00000619668 403 ntBASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
CSB-PGBD3P0DP91 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 EIF3EP1-201ENST00000433978 1316 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 ANKRD36P1-201ENST00000344424 659 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 RNU4-92P-201ENST00000363783 136 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AL031985.1-201ENST00000392713 418 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 MCTS2P-201ENST00000394552 546 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 RNU6ATAC25P-201ENST00000408798 117 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 TEX41-202ENST00000414256 604 ntTSL 5 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AC011233.1-201ENST00000422812 283 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 RPS4XP16-201ENST00000427198 791 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 MTCO2P19-201ENST00000427513 598 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 SCP2-206ENST00000430330 938 ntTSL 2 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 MTND6P5-201ENST00000448266 512 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 MYO5BP2-201ENST00000449815 1277 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 RN7SL174P-201ENST00000475578 289 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AC004815.1-201ENST00000484185 331 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 RN7SKP248-201ENST00000516278 305 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 SNORA31.13-201ENST00000516624 135 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 OR5G4P-201ENST00000525251 760 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms