Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 SNORA67-201ENST00000384423 137 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXC4P09017 AL133388.1-201ENST00000404509 287 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 AC108075.1-201ENST00000424692 529 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC4P09017 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC4P09017 FAM96AP1-201ENST00000430879 482 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC4P09017 GSTM5P1-201ENST00000434751 660 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC4P09017 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC4P09017 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXC4P09017 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC4P09017 AC021106.1-201ENST00000509020 1058 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 AC027308.1-201ENST00000517993 110 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 AP005403.1-201ENST00000579720 229 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC4P09017 AC073869.8-201ENST00000641806 335 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXC4P09017 AC097063.1-201ENST00000426714 1797 ntBASIC5.36□□□□□ -1.55
HOXC4P09017 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC4P09017 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HOXC4P09017 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC4P09017 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC4P09017 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC4P09017 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC4P09017 AL355488.2-201ENST00000609909 2850 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 AC068870.1-201ENST00000563737 2455 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HOXC4P09017 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC4P09017 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC4P09017 ZNF733P-202ENST00000444809 1573 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC4P09017 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HOXC4P09017 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC4P09017 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
HOXC4P09017 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXC4P09017 AL139148.1-201ENST00000427122 680 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 NANOGP4-201ENST00000427230 913 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC4P09017 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC4P09017 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC4P09017 AC110749.1-201ENST00000462007 357 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 ASNSP4-201ENST00000511103 447 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC4P09017 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HOXC4P09017 HAUS8P1-201ENST00000549005 542 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC4P09017 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC4P09017 AC016180.1-201ENST00000567945 403 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 AC019322.1-201ENST00000571869 389 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC4P09017 AL353729.2-201ENST00000605859 1249 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 AC016769.4-201ENST00000616893 535 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 uc_338.7-201ENST00000621834 124 ntBASIC5.35□□□□□ -1.55
HOXC4P09017 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC4P09017 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC4P09017 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC4P09017 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC4P09017 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
HOXC4P09017 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC4P09017 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC4P09017 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC4P09017 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
HOXC4P09017 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC4P09017 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
HOXC4P09017 MRRFP1-201ENST00000435941 1675 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 AC109446.4-201ENST00000623235 2755 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC4P09017 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HOXC4P09017 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HOXC4P09017 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HOXC4P09017 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC4P09017 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HOXC4P09017 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC4P09017 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC4P09017 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
HOXC4P09017 SPTLC1P2-201ENST00000407089 121 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 RPSAP35-201ENST00000413753 818 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 AC017078.1-201ENST00000416146 368 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.34□□□□□ -1.55
HOXC4P09017 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC4P09017 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC4P09017 RPL12P18-201ENST00000437175 325 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms