Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MMP3P08254 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 MT-RNR1-201ENST00000389680 954 ntBASIC6.14□□□□□ -1.43
MMP3P08254 RNF10P1-201ENST00000418589 369 ntBASIC6.14□□□□□ -1.43
MMP3P08254 AC013470.3-201ENST00000420252 1194 ntBASIC6.14□□□□□ -1.43
MMP3P08254 RNGTTP1-201ENST00000420965 728 ntBASIC6.14□□□□□ -1.43
MMP3P08254 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.14□□□□□ -1.43
MMP3P08254 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.14□□□□□ -1.43
MMP3P08254 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 RPL12P39-201ENST00000455456 496 ntBASIC6.14□□□□□ -1.43
MMP3P08254 MTND2P39-201ENST00000457230 764 ntBASIC6.14□□□□□ -1.43
MMP3P08254 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.14□□□□□ -1.43
MMP3P08254 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.14□□□□□ -1.43
MMP3P08254 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.14□□□□□ -1.43
MMP3P08254 RNA5SP116-201ENST00000516132 98 ntBASIC6.14□□□□□ -1.43
MMP3P08254 RNU6-941P-201ENST00000516346 108 ntBASIC6.14□□□□□ -1.43
MMP3P08254 SNORA26.10-201ENST00000516427 141 ntBASIC6.14□□□□□ -1.43
MMP3P08254 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 HMGB1P40-201ENST00000525121 540 ntBASIC6.14□□□□□ -1.43
MMP3P08254 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.14□□□□□ -1.43
MMP3P08254 AC090079.2-201ENST00000575289 768 ntBASIC6.14□□□□□ -1.43
MMP3P08254 AC018809.2-201ENST00000602436 3823 ntBASIC6.14□□□□□ -1.43
MMP3P08254 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 AC104307.1-201ENST00000616142 196 ntBASIC6.14□□□□□ -1.43
MMP3P08254 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MMP3P08254 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MMP3P08254 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MMP3P08254 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MMP3P08254 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MMP3P08254 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.14□□□□□ -1.43
MMP3P08254 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
MMP3P08254 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MMP3P08254 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 TET1P1-201ENST00000426627 2301 ntBASIC6.14□□□□□ -1.43
MMP3P08254 AC011493.1-201ENST00000596753 1632 ntBASIC6.14□□□□□ -1.43
MMP3P08254 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MMP3P08254 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP3P08254 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MMP3P08254 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.13□□□□□ -1.43
MMP3P08254 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MMP3P08254 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MMP3P08254 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
MMP3P08254 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP3P08254 RNU1-106P-201ENST00000384382 164 ntBASIC6.13□□□□□ -1.43
MMP3P08254 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
MMP3P08254 RN7SKP279-201ENST00000411383 298 ntBASIC6.13□□□□□ -1.43
MMP3P08254 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.13□□□□□ -1.43
MMP3P08254 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.13□□□□□ -1.43
MMP3P08254 RPL12P3-201ENST00000440080 396 ntBASIC6.13□□□□□ -1.43
MMP3P08254 CBX1P5-201ENST00000475330 559 ntBASIC6.13□□□□□ -1.43
MMP3P08254 RPS18P6-201ENST00000476880 458 ntBASIC6.13□□□□□ -1.43
MMP3P08254 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.13□□□□□ -1.43
MMP3P08254 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.13□□□□□ -1.43
MMP3P08254 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.13□□□□□ -1.43
MMP3P08254 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.13□□□□□ -1.43
MMP3P08254 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP3P08254 RN7SKP253-201ENST00000516424 309 ntBASIC6.13□□□□□ -1.43
MMP3P08254 AC130364.2-201ENST00000528639 604 ntBASIC6.13□□□□□ -1.43
MMP3P08254 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.13□□□□□ -1.43
MMP3P08254 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.13□□□□□ -1.43
MMP3P08254 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.13□□□□□ -1.43
MMP3P08254 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
MMP3P08254 AC137627.1-201ENST00000545761 289 ntBASIC6.13□□□□□ -1.43
MMP3P08254 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.13□□□□□ -1.43
MMP3P08254 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.13□□□□□ -1.43
MMP3P08254 AC009268.1-201ENST00000561352 1203 ntBASIC6.13□□□□□ -1.43
MMP3P08254 RN7SL708P-201ENST00000580952 299 ntBASIC6.13□□□□□ -1.43
MMP3P08254 H3F3BP2-201ENST00000583907 357 ntBASIC6.13□□□□□ -1.43
MMP3P08254 AC007423.1-201ENST00000605009 627 ntBASIC6.13□□□□□ -1.43
MMP3P08254 AC116651.1-201ENST00000609724 556 ntBASIC6.13□□□□□ -1.43
MMP3P08254 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP3P08254 AC090510.2-201ENST00000617465 629 ntBASIC6.13□□□□□ -1.43
MMP3P08254 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
MMP3P08254 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP3P08254 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP3P08254 AL596275.2-208ENST00000641192 594 ntBASIC6.13□□□□□ -1.43
MMP3P08254 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
MMP3P08254 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP3P08254 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MMP3P08254 BX284613.1-201ENST00000452221 1641 ntBASIC6.13□□□□□ -1.43
MMP3P08254 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP3P08254 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.13□□□□□ -1.43
MMP3P08254 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
MMP3P08254 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
MMP3P08254 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MMP3P08254 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
MMP3P08254 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 ZNF402P-201ENST00000404435 3100 ntBASIC6.12□□□□□ -1.43
MMP3P08254 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP3P08254 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
MMP3P08254 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms