Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBP04114 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.2□□□□□ -1.9
APOBP04114 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.2□□□□□ -1.9
APOBP04114 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 AC244107.2-201ENST00000611773 76 ntBASIC3.2□□□□□ -1.9
APOBP04114 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.2□□□□□ -1.9
APOBP04114 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBP04114 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBP04114 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 AL590004.4-201ENST00000566733 7060 ntBASIC3.2□□□□□ -1.9
APOBP04114 AL008638.3-201ENST00000623027 5182 ntBASIC3.2□□□□□ -1.9
APOBP04114 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC3.2□□□□□ -1.9
APOBP04114 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 AC079168.1-201ENST00000458741 345 ntBASIC3.2□□□□□ -1.9
APOBP04114 AC083829.1-201ENST00000503756 657 ntBASIC3.2□□□□□ -1.9
APOBP04114 AC012339.2-201ENST00000523996 453 ntBASIC3.2□□□□□ -1.9
APOBP04114 AC105129.1-201ENST00000560250 297 ntBASIC3.2□□□□□ -1.9
APOBP04114 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
APOBP04114 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
APOBP04114 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBP04114 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC3.19□□□□□ -1.9
APOBP04114 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
APOBP04114 RBPJP2-201ENST00000618187 1444 ntBASIC3.19□□□□□ -1.9
APOBP04114 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 RPS29P9-201ENST00000440360 171 ntBASIC3.19□□□□□ -1.9
APOBP04114 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBP04114 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBP04114 AC133555.2-201ENST00000550213 292 ntBASIC3.19□□□□□ -1.9
APOBP04114 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.19□□□□□ -1.9
APOBP04114 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 MON2-214ENST00000641654 10382 ntBASIC3.19□□□□□ -1.9
APOBP04114 AC063976.2-201ENST00000425667 3556 ntBASIC3.19□□□□□ -1.9
APOBP04114 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBP04114 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBP04114 Z97832.1-201ENST00000402490 328 ntBASIC3.19□□□□□ -1.9
APOBP04114 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBP04114 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.19□□□□□ -1.9
APOBP04114 AC010326.1-201ENST00000462726 602 ntBASIC3.19□□□□□ -1.9
APOBP04114 RPL7P19-201ENST00000469948 618 ntBASIC3.19□□□□□ -1.9
APOBP04114 NIFKP7-201ENST00000503365 834 ntBASIC3.19□□□□□ -1.9
APOBP04114 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBP04114 AC020593.1-201ENST00000507399 299 ntBASIC3.19□□□□□ -1.9
APOBP04114 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBP04114 AC020910.3-201ENST00000603701 874 ntBASIC3.19□□□□□ -1.9
APOBP04114 AL138960.1-201ENST00000613838 513 ntBASIC3.19□□□□□ -1.9
APOBP04114 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBP04114 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBP04114 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC3.19□□□□□ -1.9
APOBP04114 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBP04114 GAPDHP49-201ENST00000421421 961 ntBASIC3.19□□□□□ -1.9
APOBP04114 OR10T1P-201ENST00000424327 947 ntBASIC3.19□□□□□ -1.9
APOBP04114 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBP04114 GLUD1P3-202ENST00000508551 200 ntBASIC3.19□□□□□ -1.9
APOBP04114 AC138701.1-201ENST00000524329 714 ntBASIC3.19□□□□□ -1.9
APOBP04114 AC009643.1-201ENST00000532030 391 ntBASIC3.19□□□□□ -1.9
APOBP04114 AL121873.1-201ENST00000616013 524 ntBASIC3.19□□□□□ -1.9
APOBP04114 MVP-219ENST00000629059 120 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBP04114 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
APOBP04114 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 AL592148.3-201ENST00000608771 2646 ntBASIC3.19□□□□□ -1.9
APOBP04114 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 SAMMSON-210ENST00000641260 1308 ntBASIC3.19□□□□□ -1.9
APOBP04114 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
APOBP04114 HSPA8P15-201ENST00000401676 786 ntBASIC3.19□□□□□ -1.9
APOBP04114 PPIAP9-201ENST00000403866 498 ntBASIC3.19□□□□□ -1.9
APOBP04114 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.19□□□□□ -1.9
APOBP04114 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
APOBP04114 RPS4XP16-201ENST00000427198 791 ntBASIC3.19□□□□□ -1.9
APOBP04114 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC3.19□□□□□ -1.9
APOBP04114 RNA5SP464-201ENST00000516251 108 ntBASIC3.19□□□□□ -1.9
APOBP04114 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms