Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
COL4A1P02462 AC112498.1-201ENST00000444401 332 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 snoU13.29-201ENST00000459370 104 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 AC020779.1-201ENST00000478757 796 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A1P02462 AC140172.1-201ENST00000502928 141 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 AC010350.1-201ENST00000504908 231 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 UBE2FP2-201ENST00000566646 462 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A1P02462 AC104785.1-201ENST00000603220 588 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
COL4A1P02462 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A1P02462 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A1P02462 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A1P02462 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A1P02462 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A1P02462 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL4A1P02462 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A1P02462 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL4A1P02462 AP000547.3-204ENST00000588548 2523 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A1P02462 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL4A1P02462 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A1P02462 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL4A1P02462 OR9G4-201ENST00000302957 984 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 FAM3C2-201ENST00000312214 681 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL4A1P02462 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL4A1P02462 GAPDHP15-201ENST00000398586 975 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.33□□□□□ -1.4
COL4A1P02462 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.33□□□□□ -1.4
COL4A1P02462 AC099670.2-201ENST00000435130 321 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A1P02462 IGHV5-78-201ENST00000450948 295 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.33□□□□□ -1.4
COL4A1P02462 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.33□□□□□ -1.4
COL4A1P02462 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.33□□□□□ -1.4
COL4A1P02462 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A1P02462 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A1P02462 AC105129.1-201ENST00000560250 297 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 AC119674.1-217ENST00000641942 1086 ntBASIC6.33□□□□□ -1.4
COL4A1P02462 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A1P02462 AC073365.1-203ENST00000641055 1992 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A1P02462 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COL4A1P02462 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A1P02462 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 AP003175.1-201ENST00000641383 6658 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
COL4A1P02462 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A1P02462 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A1P02462 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A1P02462 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
COL4A1P02462 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A1P02462 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A1P02462 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A1P02462 AL772161.1-201ENST00000439130 476 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 CEACAMP9-201ENST00000442990 513 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A1P02462 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.32□□□□□ -1.4
COL4A1P02462 OR51A1P-201ENST00000511110 946 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A1P02462 PCNPP1-201ENST00000552501 511 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 BNIP3P35-201ENST00000604530 490 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 AL162431.4-201ENST00000604674 411 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 AL139124.1-201ENST00000609123 421 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 MIR6133-201ENST00000617057 108 ntBASIC6.32□□□□□ -1.4
COL4A1P02462 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A1P02462 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.32□□□□□ -1.4
COL4A1P02462 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.32□□□□□ -1.4
COL4A1P02462 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
COL4A1P02462 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A1P02462 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A1P02462 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A1P02462 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
COL4A1P02462 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A1P02462 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A1P02462 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A1P02462 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL4A1P02462 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A1P02462 RNU6-398P-201ENST00000384143 109 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 MIR589-201ENST00000385238 99 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A1P02462 USP9YP9-201ENST00000429406 715 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 RPS29P10-201ENST00000439197 166 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A1P02462 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.31□□□□□ -1.4
COL4A1P02462 AC073264.2-201ENST00000448886 166 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 TCEA1P1-201ENST00000449716 880 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 AC005412.2-201ENST00000492004 341 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A1P02462 AC079064.1-201ENST00000528365 362 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A1P02462 AF230666.2-201ENST00000602328 725 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 EIF3FP1-201ENST00000613970 806 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 NBPF8-201ENST00000583271 5330 ntBASIC6.31□□□□□ -1.4
COL4A1P02462 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A1P02462 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.31□□□□□ -1.4
COL4A1P02462 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A1P02462 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms