Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 OR7E101P-201ENST00000400428 513 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 NIFKP3-201ENST00000417799 865 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX2-2O95096 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.33□□□□□ -1.56
NKX2-2O95096 BX323845.3-201ENST00000428215 527 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 MEMO1P4-201ENST00000453590 386 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 AP000547.1-201ENST00000454360 617 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 ACA64.1-201ENST00000459171 127 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 RPS23P2-201ENST00000463671 415 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 RN7SL570P-201ENST00000484405 292 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 MTCO2P9-201ENST00000503214 694 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 AC016550.1-201ENST00000505348 785 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 RN7SKP70-201ENST00000516655 271 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 OR4A17P-201ENST00000526032 904 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AL512310.9-201ENST00000553311 948 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AC023158.1-201ENST00000561632 1025 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 ZNF322P1-201ENST00000568013 1209 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX2-2O95096 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX2-2O95096 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.33□□□□□ -1.56
NKX2-2O95096 RPL12P48-201ENST00000605620 304 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 AC108865.2-201ENST00000606881 432 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 AC000095.2-202ENST00000637415 154 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 AC232271.1-201ENST00000602455 2715 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AC079298.1-201ENST00000625026 1619 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.33□□□□□ -1.56
NKX2-2O95096 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NKX2-2O95096 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX2-2O95096 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
NKX2-2O95096 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 MSL3P1-202ENST00000440028 1468 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 AC007382.1-201ENST00000624376 2618 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 AC009962.1-201ENST00000567327 3813 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 AC239868.2-201ENST00000564237 4527 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NKX2-2O95096 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NKX2-2O95096 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 TAF9BP2-201ENST00000400856 499 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX2-2O95096 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX2-2O95096 AL158053.1-201ENST00000441503 453 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 RPL23AP23-201ENST00000452590 471 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 NPM1P29-201ENST00000483112 803 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 RPS7P6-201ENST00000485777 579 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 AC073610.1-201ENST00000489971 396 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 RN7SL205P-201ENST00000490174 284 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 AC009120.1-201ENST00000493458 473 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.32□□□□□ -1.56
NKX2-2O95096 AC114781.3-201ENST00000512083 142 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.32□□□□□ -1.56
NKX2-2O95096 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 IGHV3-63-201ENST00000518422 341 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX2-2O95096 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX2-2O95096 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX2-2O95096 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.32□□□□□ -1.56
NKX2-2O95096 AC122134.1-202ENST00000569111 1201 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms