Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
MSI1O43347 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.92□□□□□ -1.46
MSI1O43347 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
MSI1O43347 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
MSI1O43347 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
MSI1O43347 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
MSI1O43347 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
MSI1O43347 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MSI1O43347 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MSI1O43347 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.92□□□□□ -1.46
MSI1O43347 AC096644.3-201ENST00000416788 338 ntBASIC5.92□□□□□ -1.46
MSI1O43347 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.92□□□□□ -1.46
MSI1O43347 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.92□□□□□ -1.46
MSI1O43347 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.92□□□□□ -1.46
MSI1O43347 AL354692.1-201ENST00000423044 315 ntBASIC5.92□□□□□ -1.46
MSI1O43347 RPL5P2-201ENST00000429598 854 ntBASIC5.92□□□□□ -1.46
MSI1O43347 FMO7P-201ENST00000436045 768 ntBASIC5.92□□□□□ -1.46
MSI1O43347 Z84478.1-201ENST00000438230 1219 ntBASIC5.92□□□□□ -1.46
MSI1O43347 AC005297.1-201ENST00000444765 862 ntBASIC5.92□□□□□ -1.46
MSI1O43347 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.92□□□□□ -1.46
MSI1O43347 AC023141.9-201ENST00000458734 412 ntBASIC5.92□□□□□ -1.46
MSI1O43347 AC108751.3-201ENST00000461814 1020 ntBASIC5.92□□□□□ -1.46
MSI1O43347 RPS23P2-201ENST00000463671 415 ntBASIC5.92□□□□□ -1.46
MSI1O43347 RPS3AP15-201ENST00000483874 781 ntBASIC5.92□□□□□ -1.46
MSI1O43347 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.92□□□□□ -1.46
MSI1O43347 AC074255.1-201ENST00000511259 501 ntBASIC5.92□□□□□ -1.46
MSI1O43347 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.92□□□□□ -1.46
MSI1O43347 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.92□□□□□ -1.46
MSI1O43347 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.92□□□□□ -1.46
MSI1O43347 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.92□□□□□ -1.46
MSI1O43347 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.92□□□□□ -1.46
MSI1O43347 AP003102.1-201ENST00000525638 661 ntBASIC5.92□□□□□ -1.46
MSI1O43347 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MSI1O43347 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.92□□□□□ -1.46
MSI1O43347 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.92□□□□□ -1.46
MSI1O43347 AC126615.2-201ENST00000553003 515 ntBASIC5.92□□□□□ -1.46
MSI1O43347 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.92□□□□□ -1.46
MSI1O43347 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.92□□□□□ -1.46
MSI1O43347 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.92□□□□□ -1.46
MSI1O43347 AC090607.5-201ENST00000615692 224 ntBASIC5.92□□□□□ -1.46
MSI1O43347 AC074276.2-201ENST00000619891 348 ntBASIC5.92□□□□□ -1.46
MSI1O43347 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
MSI1O43347 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.92□□□□□ -1.46
MSI1O43347 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
MSI1O43347 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.92□□□□□ -1.46
MSI1O43347 CASC19-260ENST00000641828 2001 ntBASIC5.92□□□□□ -1.46
MSI1O43347 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
MSI1O43347 YES1P1-201ENST00000418510 1628 ntBASIC5.92□□□□□ -1.46
MSI1O43347 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
MSI1O43347 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
MSI1O43347 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.91□□□□□ -1.46
MSI1O43347 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
MSI1O43347 AMZ2P2-201ENST00000406819 1057 ntBASIC5.91□□□□□ -1.46
MSI1O43347 AL355143.1-201ENST00000407101 841 ntBASIC5.91□□□□□ -1.46
MSI1O43347 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.91□□□□□ -1.46
MSI1O43347 OR6E1P-201ENST00000414424 923 ntBASIC5.91□□□□□ -1.46
MSI1O43347 SDHDP6-201ENST00000414693 480 ntBASIC5.91□□□□□ -1.46
MSI1O43347 AL596448.1-201ENST00000415024 392 ntBASIC5.91□□□□□ -1.46
MSI1O43347 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.91□□□□□ -1.46
MSI1O43347 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.91□□□□□ -1.46
MSI1O43347 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.91□□□□□ -1.46
MSI1O43347 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.91□□□□□ -1.46
MSI1O43347 AC018635.1-201ENST00000468292 1030 ntBASIC5.91□□□□□ -1.46
MSI1O43347 AC087672.1-201ENST00000479876 766 ntBASIC5.91□□□□□ -1.46
MSI1O43347 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.91□□□□□ -1.46
MSI1O43347 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.91□□□□□ -1.46
MSI1O43347 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.91□□□□□ -1.46
MSI1O43347 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.91□□□□□ -1.46
MSI1O43347 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.91□□□□□ -1.46
MSI1O43347 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.91□□□□□ -1.46
MSI1O43347 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.91□□□□□ -1.46
MSI1O43347 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
MSI1O43347 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.91□□□□□ -1.46
MSI1O43347 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.91□□□□□ -1.46
MSI1O43347 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.91□□□□□ -1.46
MSI1O43347 AC010547.7-201ENST00000570323 333 ntBASIC5.91□□□□□ -1.46
MSI1O43347 MIR4505-201ENST00000582238 73 ntBASIC5.91□□□□□ -1.46
MSI1O43347 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.91□□□□□ -1.46
MSI1O43347 AL133481.2-203ENST00000607558 139 ntBASIC5.91□□□□□ -1.46
MSI1O43347 AL391834.1-201ENST00000609609 560 ntBASIC5.91□□□□□ -1.46
MSI1O43347 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.91□□□□□ -1.46
MSI1O43347 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.91□□□□□ -1.46
MSI1O43347 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.91□□□□□ -1.46
MSI1O43347 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.91□□□□□ -1.46
MSI1O43347 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
MSI1O43347 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 AL929601.4-201ENST00000613011 1341 ntBASIC5.91□□□□□ -1.46
MSI1O43347 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.91□□□□□ -1.46
MSI1O43347 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MSI1O43347 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms