Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 MAX-203ENST00000341653 330 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SKP130-201ENST00000364924 301 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RNU6-1279P-201ENST00000383917 103 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RNA5SP372-201ENST00000390836 115 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RNA5SP177-201ENST00000410122 107 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 CEACAMP8-201ENST00000413902 580 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 ELOBP4-201ENST00000423418 296 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RPL12P17-201ENST00000432393 498 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 DEFA9P-201ENST00000433042 285 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC013410.1-201ENST00000436223 1232 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 PSMD10P3-201ENST00000437000 448 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RPL35AP21-201ENST00000437667 333 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 EIF4A2P2-201ENST00000455776 1070 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 HSPE1P22-201ENST00000456856 327 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL517P-201ENST00000462240 305 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC026348.1-201ENST00000462549 1053 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL213P-201ENST00000463482 317 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC099521.1-201ENST00000482557 334 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 DEFB109F-201ENST00000491870 277 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 DUTP1-201ENST00000493631 470 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RPS24P16-201ENST00000497294 392 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 IGBP1P4-201ENST00000503202 879 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC008629.2-201ENST00000503783 483 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 Z99943.2-201ENST00000507585 266 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC074087.1-201ENST00000512059 724 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC105031.1-201ENST00000518550 476 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 IGHV3-32-201ENST00000519182 355 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 IGHVIII-76-1-201ENST00000523776 286 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC025252.2-201ENST00000537470 502 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 HIGD1AP9-201ENST00000550710 279 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AL352979.3-201ENST00000553515 247 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC068446.3-201ENST00000555285 382 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 OR4F28P-201ENST00000559128 938 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL131P-201ENST00000579043 256 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 OR4F8P-201ENST00000589943 937 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC068790.5-201ENST00000602741 355 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC008638.3-201ENST00000603341 463 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC026468.1-201ENST00000614981 107 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AC090607.5-201ENST00000615692 224 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AL669942.2-201ENST00000620352 697 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 MIR6503-201ENST00000622884 86 ntBASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
CHKB-CPT1BH3BT56 AL354854.1-201ENST00000455940 1363 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 HCFC2P1-201ENST00000392864 1592 ntBASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 CRYGA-201ENST00000304502 609 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CHKB-CPT1BH3BT56 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms